SCOP 1.75: Domain d3ckbb1: 3ckb B:42-551

Lineage for d3ckbb1 (3ckb B:42-551)

1. Root: SCOP 1.75

2. Class a: All alpha proteins [46456] (284 folds)

3. Fold a.118: alpha-alpha superhelix [48370] (24 superfamilies)
   multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix

4. Superfamily a.118.8: TPR-like [48452] (8 families)

5. Family a.118.8.6: SusD-like [158775] (3 proteins)
   TPR-like structure resides in the N-terminal part; the C-terminal part is structurally unique and is covered by Pfam PF07980

6. Protein Starch utilization system protein SusD [158780] (1 species)

7. Species Bacteroides thetaiotaomicron [TaxId:818] [158781] (5 PDB entries)
   Uniprot Q8A1G2 42-551

8. Domain d3ckbb1: 3ckb B:42-551 [156735]
   automatically matched to 3CK7 A:42-551
   complexed with ca, mlr

Details for d3ckbb1

PDB Entry: 3ckb, 2.3 Å

PDB Description: b. thetaiotaomicron susd with maltotriose

PDB Compounds: (B:) SusD

SCOP Domain Sequences for d3ckbb1:

Sequence, based on SEQRES records:

>d3ckbb1 a.118.8.6 (B:42-551) Starch utilization system protein SusD {Bacteroides thetaiotaomicron [TaxId: 818]}
fdqqgvfvkgyamlgvtgqkgidgspdldgqdegesgfyrttfncnelptdeclwawqkn
qdipqltsiswspssqrtewvyvrlgyditqynffldqtegmtdaetlrqraeirflral
hywyfldlfgkapfkehfsndlpvekkgtelytyiqnelneieadmyeprqapfgradka
anwllrarlylnagvytgqtdyakaeeyaskvigsayklctnyselfmadndenenamqe
iilpirqdgvktrnyggstylvcgtrvagmprmgttngwscifaraamvqkffsnledvp
mlpadveiptkgldtdeqidafdaehgirtedmikaagddrallysgvgggrrkiqtdai
sgftdglsivkwqnyrsdgkpvshatypdtdiplfrlaeayltraeaifrqggdatgdin
elrkranctrkvqtvteqelidewarefylegrrrsdlvrfgmfttnkylwdwkggamng
tsvasyynkypipvsdinnnrnmsqnegyk

Sequence, based on observed residues (ATOM records):

>d3ckbb1 a.118.8.6 (B:42-551) Starch utilization system protein SusD {Bacteroides thetaiotaomicron [TaxId: 818]}
fdqqgvfvkgyamlgvtgdgqdegesgfyrttfncnelptdeclwawqknqdipqltsis
wspssqrtewvyvrlgyditqynffldqtegmtdaetlrqraeirflralhywyfldlfg
kapfkehfsndlpvekkgtelytyiqnelneieadmyeprqapfgradkaanwllrarly
lnagvytgqtdyakaeeyaskvigsayklctnyselfmadndenenamqeiilpirqdgv
ktrnyggstylvcgtrvagmprmgttngwscifaraamvqkffsnledvpmlpadveipt
kgldtdeqidafdaehgirtedmikaagddrallysgvgggrrkiqtdaisgftdglsiv
kwqnyrsdgkpvshatypdtdiplfrlaeayltraeaifrqggdatgdinelrkranctr
kvqtvteqelidewarefylegrrrsdlvrfgmfttnkylwdwkggamngtsvasyynky
pipvsdinnnrnmsqnegyk

Timeline for d3ckbb1:

• d3ckbb1 is new in SCOP 1.75
  
• d3ckbb1 is called d3ckbb_ in SCOPe 2.01
  
• d3ckbb1 appears in the current release, SCOPe 2.08, called d3ckbb_