SCOPe 2.08: Domain d3ckba_: 3ckb A:

Lineage for d3ckba_ (3ckb A:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.118: alpha-alpha superhelix [48370] (28 superfamilies)
   multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix

4. Superfamily a.118.8: TPR-like [48452] (11 families)

5. Family a.118.8.6: SusD-like [158775] (4 proteins)
   TPR-like structure resides in the N-terminal part; the C-terminal part is structurally unique and is covered by Pfam PF07980

6. Protein Starch utilization system protein SusD [158780] (1 species)

7. Species Bacteroides thetaiotaomicron [TaxId:818] [158781] (5 PDB entries)
   Uniprot Q8A1G2 42-551

8. Domain d3ckba_: 3ckb A: [156734]
   automated match to d3ck7a1
   complexed with ca

Details for d3ckba_

PDB Entry: 3ckb, 2.3 Å

PDB Description: b. thetaiotaomicron susd with maltotriose

PDB Compounds: (A:) SusD

SCOPe Domain Sequences for d3ckba_:

Sequence, based on SEQRES records:

>d3ckba_ a.118.8.6 (A:) Starch utilization system protein SusD {Bacteroides thetaiotaomicron [TaxId: 818]}
sfdqqgvfvkgyamlgvtgqkgidgspdldgqdegesgfyrttfncnelptdeclwawqk
nqdipqltsiswspssqrtewvyvrlgyditqynffldqtegmtdaetlrqraeirflra
lhywyfldlfgkapfkehfsndlpvekkgtelytyiqnelneieadmyeprqapfgradk
aanwllrarlylnagvytgqtdyakaeeyaskvigsayklctnyselfmadndenenamq
eiilpirqdgvktrnyggstylvcgtrvagmprmgttngwscifaraamvqkffsnledv
pmlpadveiptkgldtdeqidafdaehgirtedmikaagddrallysgvgggrrkiqtda
isgftdglsivkwqnyrsdgkpvshatypdtdiplfrlaeayltraeaifrqggdatgdi
nelrkranctrkvqtvteqelidewarefylegrrrsdlvrfgmfttnkylwdwkggamn
gtsvasyynkypipvsdinnnrnmsqnegyk

Sequence, based on observed residues (ATOM records):

>d3ckba_ a.118.8.6 (A:) Starch utilization system protein SusD {Bacteroides thetaiotaomicron [TaxId: 818]}
sfdqqgvfvkgyamlgvtgpdldgqdegesgfyrttfncnelptdeclwawqknqdipql
tsiswspssqrtewvyvrlgyditqynffldqtegmtdaetlrqraeirflralhywyfl
dlfgkapfkehfsndlpvekkgtelytyiqnelneieadmyeprqapfgradkaanwllr
arlylnagvytgqtdyakaeeyaskvigsayklctnyselfmadndenenamqeiilpir
qdgvktrnyggstylvcgtrvagmprmgttngwscifaraamvqkffsnledvpmlpadv
eiptkgldtdeqidafdaehgirtedmikaagddrallysgvgggrrkiqtdaisgftdg
lsivkwqnyrsdgkpvshatypdtdiplfrlaeayltraeaifrqggdatgdinelrkra
nctrkvqtvteqelidewarefylegrrrsdlvrfgmfttnkylwdwkggamngtsvasy
ynkypipvsdinnnrnmsqnegyk

Timeline for d3ckba_:

• d3ckba_ first appeared in SCOP 1.75, called d3ckba1
  
• d3ckba_ appears in SCOPe 2.07