SCOPe 2.06: Domain d1qgwc_: 1qgw C:

Lineage for d1qgwc_ (1qgw C:)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.1: Globin-like [46457] (2 superfamilies)
   core: 6 helices; folded leaf, partly opened

4. Superfamily a.1.1: Globin-like [46458] (5 families)

5. Family a.1.1.3: Phycocyanin-like phycobilisome proteins [46532] (7 proteins)
   oligomers of two different types of globin-like subunits containing two extra helices at the N-terminus
   binds a bilin chromophore
   automatically mapped to Pfam PF00502

6. Protein Phycoerythrin beta subunit [88513] (4 species)

7. Species Cryptophyte (Rhodomonas sp. CS24) [TaxId:79257] [46544] (3 PDB entries)
   Uniprot P27198

8. Domain d1qgwc_: 1qgw C: [15673]
   Other proteins in same PDB: d1qgwa_, d1qgwb_
   complexed with cl, dbv, mg, peb

Details for d1qgwc_

PDB Entry: 1qgw, 1.63 Å

PDB Description: crystal structure of phycoerythrin 545 from the marine cryptophyte rhodomonas cs24

PDB Compounds: (C:) protein (cryptophytan phycoerythrin (beta chain))

SCOPe Domain Sequences for d1qgwc_:

Sequence, based on SEQRES records:

>d1qgwc_ a.1.1.3 (C:) Phycoerythrin beta subunit {Cryptophyte (Rhodomonas sp. CS24) [TaxId: 79257]}
dafsrvvtnadskaayvggadlqalkkfisegnkrldsvnsivsnascivsdavsgmice
npslispsgncytnrrmaaclrdgeiilryvsyallsgdasvledrclnglketysslgv
pansnaravsimkacavafvnntasqkklstpqgdcsglasevggyfdkvtaais

Sequence, based on observed residues (ATOM records):

>d1qgwc_ a.1.1.3 (C:) Phycoerythrin beta subunit {Cryptophyte (Rhodomonas sp. CS24) [TaxId: 79257]}
dafsrvvaayvggadlqalkkfisegnkrldsvnsivsnascivsdavsgmicenpslis
psgncytnrrmaaclrdgeiilryvsyallsgdasvledrclnglketysslgvpansna
ravsimkacavafvnntasqkklstpqgdcsglasevggyfdkvtaais

Timeline for d1qgwc_:

• d1qgwc_ first appeared (with stable ids) in SCOP 1.55
  
• d1qgwc_ appears in SCOPe 2.05
  
• d1qgwc_ appears in SCOPe 2.07
  
• d1qgwc_ appears in the current release, SCOPe 2.08