Lineage for d3bdmu_ (3bdm U:)

  1. Root: SCOPe 2.02
  2. 1190016Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1222614Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 1222615Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 1222781Family d.153.1.4: Proteasome subunits [56251] (4 proteins)
  6. 1223777Protein automated matches [190144] (8 species)
    not a true protein
  7. 1223798Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [187078] (20 PDB entries)
  8. 1223872Domain d3bdmu_: 3bdm U: [155148]
    Other proteins in same PDB: d3bdm01, d3bdm1_, d3bdma_, d3bdme_, d3bdmf1, d3bdmi_, d3bdmj_, d3bdmk_, d3bdmm1, d3bdmn_, d3bdmo_, d3bdms_, d3bdmt1, d3bdmw_, d3bdmx_, d3bdmy_
    automated match to d1g65g_
    complexed with gdt

Details for d3bdmu_

PDB Entry: 3bdm (more details), 2.7 Å

PDB Description: yeast 20S proteasome:glidobactin A-complex
PDB Compounds: (U:) Proteasome component C7-alpha

SCOPe Domain Sequences for d3bdmu_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3bdmu_ d.153.1.4 (U:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
agydrhitifspegrlyqveyafkatnqtninslavrgkdctvvisqkkvpdklldpttv
syifcisrtigmvvngpipdarnaalrakaeaaefrykygydmpcdvlakrmanlsqiyt
qraymrplgviltfvsvdeelgpsiyktdpagyyvgykatatgpkqqeittnlenhfkks
kidhineeswekvvefaithmidalgtefskndlevgvatkdkfftlsaenieerlvaia
eqd

SCOPe Domain Coordinates for d3bdmu_:

Click to download the PDB-style file with coordinates for d3bdmu_.
(The format of our PDB-style files is described here.)

Timeline for d3bdmu_: