SCOPe 2.03: Domain d2zkrv1: 2zkr v:4-60

Lineage for d2zkrv1 (2zkr v:4-60)

1. Root: SCOPe 2.03

2. Class i: Low resolution protein structures [58117] (25 folds)

3. Fold i.1: Ribosome and ribosomal fragments [58118] (1 superfamily)

4. Superfamily i.1.1: Ribosome and ribosomal fragments [58119] (3 families)

5. Family i.1.1.2: Large subunit [58124] (1 protein)

6. Protein 50S subunit [58125] (6 species)

7. Species Dog (Canis familiaris) [TaxId:9615] [161280] (1 PDB entry)

8. Domain d2zkrv1: 2zkr v:4-60 [154616]
   Other proteins in same PDB: d2zkr21, d2zkr41, d2zkra1, d2zkrc1, d2zkrd1, d2zkre1, d2zkrh1, d2zkrj1, d2zkrk1, d2zkro1, d2zkrq1, d2zkrr1, d2zkrs1, d2zkru1, d2zkrx1, d2zkrz1
   automatically matched to d1w2bu_
   protein/RNA complex

Details for d2zkrv1

PDB Entry: 2zkr, 8.7 Å

PDB Description: Structure of a mammalian Ribosomal 60S subunit within an 80S complex obtained by docking homology models of the RNA and proteins into an 8.7 A cryo-EM map

PDB Compounds: (v:) 60S Ribosomal protein L35

SCOPe Domain Sequences for d2zkrv1:

Sequence; same for both SEQRES and ATOM records:

>d2zkrv1 i.1.1.2 (v:4-60) 50S subunit {Dog (Canis familiaris) [TaxId: 9615]}
ikardlrgkkkeellkqlddlkvelsqlrvakvtggaasklskirvvrksiarvltv

Timeline for d2zkrv1:

• d2zkrv1 first appeared in SCOP 1.75
  
• d2zkrv1 appears in SCOPe 2.02
  
• d2zkrv1 appears in SCOPe 2.04
  
• d2zkrv1 appears in the current release, SCOPe 2.08