Lineage for d2vr4b1 (2vr4 B:220-330)

  1. Root: SCOP 1.75
  2. 781541Class b: All beta proteins [48724] (174 folds)
  3. 781542Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 787894Superfamily b.1.4: beta-Galactosidase/glucuronidase domain [49303] (1 family) (S)
  5. 787895Family b.1.4.1: beta-Galactosidase/glucuronidase domain [49304] (4 proteins)
  6. 788179Protein Beta-mannosidase, domains 2, 4 and 5 [158905] (1 species)
    truncated domain 5 lacks the last strand
  7. 788180Species Bacteroides thetaiotaomicron [TaxId:818] [158906] (9 PDB entries)
    Uniprot Q8AAK6 220-330! Uniprot Q8AAK6 679-783! Uniprot Q8AAK6 784-864
  8. 788196Domain d2vr4b1: 2vr4 B:220-330 [153500]
    Other proteins in same PDB: d2vr4a4, d2vr4a5, d2vr4b4, d2vr4b5
    automatically matched to 2JE8 A:220-330
    complexed with 17b, br, cl, edo

Details for d2vr4b1

PDB Entry: 2vr4 (more details), 1.8 Å

PDB Description: transition-state mimicry in mannoside hydrolysis: characterisation of twenty six inhibitors and insight into binding from linear free energy relationships and 3-d structure
PDB Compounds: (B:) beta-mannosidase

SCOP Domain Sequences for d2vr4b1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2vr4b1 b.1.4.1 (B:220-330) Beta-mannosidase, domains 2, 4 and 5 {Bacteroides thetaiotaomicron [TaxId: 818]}
iatisdyyvrqlsltdenarlsnelivnqivpqkipaevrvnvslngttvtevkqqvtlq
pginhitlpaevtnpvrwmpngwgtptlydfsaqiacgdrivaeqshrigl

SCOP Domain Coordinates for d2vr4b1:

Click to download the PDB-style file with coordinates for d2vr4b1.
(The format of our PDB-style files is described here.)

Timeline for d2vr4b1: