SCOPe 2.08: Domain d2vn5c_: 2vn5 C:

Lineage for d2vn5c_ (2vn5 C:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
   sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold

4. Superfamily b.2.2: Carbohydrate-binding domain [49384] (4 families)

5. Family b.2.2.2: Cellulose-binding domain family III [49390] (9 proteins)
   Pfam PF00963

6. Protein Cohesin domain [49396] (2 species)

7. Species Clostridium cellulolyticum [TaxId:1521] [158919] (2 PDB entries)

8. Domain d2vn5c_: 2vn5 C: [153331]
   Other proteins in same PDB: d2vn5b_, d2vn5d_
   automated match to d1g1ka_
   complexed with ca

Details for d2vn5c_

PDB Entry: 2vn5, 1.9 Å

PDB Description: the clostridium cellulolyticum dockerin displays a dual binding mode for its cohesin partner

PDB Compounds: (C:) scaffolding protein

SCOPe Domain Sequences for d2vn5c_:

Sequence, based on SEQRES records:

>d2vn5c_ b.2.2.2 (C:) Cohesin domain {Clostridium cellulolyticum [TaxId: 1521]}
tvlpkdipgdslkvtvgtangkpgdtvtvpvtfadvakmknvgtcnfylgydasllevvs
vdagpivknaavnfsssasngtisflfldntitdelitadgvfanikfklksvtaktttp
vtfkdggafgdgtmskiasvtktngsvtidp

Sequence, based on observed residues (ATOM records):

>d2vn5c_ b.2.2.2 (C:) Cohesin domain {Clostridium cellulolyticum [TaxId: 1521]}
tvlpkddslkvtvgtangkpgdtvtvpvtfadvakmknvgtcnfylgydasllevvsvda
gpivknaavnfsssasngtisflfldntitdelitadgvfanikfklksvtaktttpvtf
kdggafgdgtmskiasvtktngsvtidp

Timeline for d2vn5c_:

• d2vn5c_ first appeared in SCOP 1.75, called d2vn5c1
  
• d2vn5c_ appears in SCOPe 2.07