SCOPe 2.03: Domain d2vhms1: 2vhm S:1-110

Lineage for d2vhms1 (2vhm S:1-110)

1. Root: SCOPe 2.03

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.55: Ribosomal protein L22 [54842] (1 superfamily)
   beta-alpha(3)-beta(2); 2 layers: alpha/beta; related to the enolase/MLE N-domain fold by a circular permutation

4. Superfamily d.55.1: Ribosomal protein L22 [54843] (1 family)
   some topological similarity to prokaryotic ribosomal protein L17

5. Family d.55.1.1: Ribosomal protein L22 [54844] (1 protein)

6. Protein Ribosomal protein L22 [54845] (5 species)

7. Species Escherichia coli [TaxId:562] [160266] (29 PDB entries)
   Uniprot P61175 1-110

8. Domain d2vhms1: 2vhm S:1-110 [153082]
   Other proteins in same PDB: d2vhm01, d2vhm11, d2vhm31, d2vhm41, d2vhmc1, d2vhmc2, d2vhmd1, d2vhme1, d2vhmf1, d2vhmg1, d2vhmg2, d2vhmh1, d2vhmh2, d2vhmi1, d2vhmi2, d2vhmj1, d2vhmk1, d2vhml1, d2vhmm1, d2vhmn1, d2vhmo1, d2vhmp1, d2vhmq1, d2vhmr1, d2vhmt1, d2vhmu1, d2vhmv1, d2vhmw1, d2vhmx1, d2vhmy1, d2vhmz1
   automatically matched to 2AW4 S:1-110
   protein/RNA complex; complexed with mg

Details for d2vhms1

PDB Entry: 2vhm, 3.74 Å

PDB Description: Structure of PDF binding helix in complex with the ribosome

PDB Compounds: (S:) 50S ribosomal protein L22

SCOPe Domain Sequences for d2vhms1:

Sequence; same for both SEQRES and ATOM records:

>d2vhms1 d.55.1.1 (S:1-110) Ribosomal protein L22 {Escherichia coli [TaxId: 562]}
metiakhrharssaqkvrlvadlirgkkvsqaldiltytnkkaavlvkkvlesaianaeh
ndgadiddlkvtkifvdegpsmkrimprakgradrilkrtshitvvvsdr

Timeline for d2vhms1:

• d2vhms1 first appeared in SCOP 1.75
  
• d2vhms1 appears in SCOPe 2.02
  
• d2vhms1 appears in SCOPe 2.04
  
• d2vhms1 appears in the current release, SCOPe 2.08