SCOPe 2.03: Domain d2vhmn1: 2vhm N:1-127

Lineage for d2vhmn1 (2vhm N:1-127)

1. Root: SCOPe 2.03

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.188: Prokaryotic ribosomal protein L17 [64262] (1 superfamily)
   alpha-beta-alpha(3)-beta(2); 2 layers: alpha/beta;

4. Superfamily d.188.1: Prokaryotic ribosomal protein L17 [64263] (1 family)
   some topological similarity to ribosomal protein L22
   automatically mapped to Pfam PF01196

5. Family d.188.1.1: Prokaryotic ribosomal protein L17 [64264] (1 protein)

6. Protein Prokaryotic ribosomal protein L17 [64265] (4 species)

7. Species Escherichia coli [TaxId:562] [160270] (27 PDB entries)
   Uniprot P02416 1-127

8. Domain d2vhmn1: 2vhm N:1-127 [153077]
   Other proteins in same PDB: d2vhm01, d2vhm11, d2vhm31, d2vhm41, d2vhmc1, d2vhmc2, d2vhmd1, d2vhme1, d2vhmf1, d2vhmg1, d2vhmg2, d2vhmh1, d2vhmh2, d2vhmi1, d2vhmi2, d2vhmj1, d2vhmk1, d2vhml1, d2vhmm1, d2vhmo1, d2vhmp1, d2vhmq1, d2vhmr1, d2vhms1, d2vhmt1, d2vhmu1, d2vhmv1, d2vhmw1, d2vhmx1, d2vhmy1, d2vhmz1
   automatically matched to 2AW4 N:1-127
   protein/RNA complex; complexed with mg

Details for d2vhmn1

PDB Entry: 2vhm, 3.74 Å

PDB Description: Structure of PDF binding helix in complex with the ribosome

PDB Compounds: (N:) 50S ribosomal protein L17

SCOPe Domain Sequences for d2vhmn1:

Sequence; same for both SEQRES and ATOM records:

>d2vhmn1 d.188.1.1 (N:1-127) Prokaryotic ribosomal protein L17 {Escherichia coli [TaxId: 562]}
mrhrksgrqlnrnsshrqamfrnmagslvrheiikttlpkakelrrvveplitlaktdsv
anrrlafartrdneivaklfnelgprfasraggytrilkcgfragdnapmayielvdrse
kaeaaae

Timeline for d2vhmn1:

• d2vhmn1 first appeared in SCOP 1.75
  
• d2vhmn1 appears in SCOPe 2.02
  
• d2vhmn1 appears in SCOPe 2.04
  
• d2vhmn1 appears in the current release, SCOPe 2.08