SCOPe 2.01: Domain d2vhmc1: 2vhm C:125-269

Lineage for d2vhmc1 (2vhm C:125-269)

1. Root: SCOPe 2.01

2. Class b: All beta proteins [48724] (174 folds)

3. Fold b.34: SH3-like barrel [50036] (21 superfamilies)
   barrel, partly opened; n*=4, S*=8; meander
   the last strand is interrupted by a turn of 3-10 helix

4. Superfamily b.34.5: Translation proteins SH3-like domain [50104] (7 families)
   many known members contain KOW motif

5. Family b.34.5.3: C-terminal domain of ribosomal protein L2 [50114] (1 protein)

6. Protein C-terminal domain of ribosomal protein L2 [50115] (5 species)

7. Species Escherichia coli [TaxId:562] [159027] (27 PDB entries)
   Uniprot P60422 125-269

8. Domain d2vhmc1: 2vhm C:125-269 [153062]
   Other proteins in same PDB: d2vhm01, d2vhm11, d2vhm31, d2vhm41, d2vhmc2, d2vhmd1, d2vhme1, d2vhmf1, d2vhmg1, d2vhmg2, d2vhmh1, d2vhmh2, d2vhmi1, d2vhmi2, d2vhmj1, d2vhmk1, d2vhml1, d2vhmm1, d2vhmn1, d2vhmo1, d2vhmp1, d2vhmq1, d2vhmr1, d2vhms1, d2vhmt1, d2vhmu1, d2vhmv1, d2vhmw1, d2vhmx1, d2vhmy1, d2vhmz1
   automatically matched to 2AW4 C:125-269
   protein/RNA complex; complexed with mg

Details for d2vhmc1

PDB Entry: 2vhm, 3.74 Å

PDB Description: Structure of PDF binding helix in complex with the ribosome

PDB Compounds: (C:) 50S ribosomal protein L2

SCOPe Domain Sequences for d2vhmc1:

Sequence; same for both SEQRES and ATOM records:

>d2vhmc1 b.34.5.3 (C:125-269) C-terminal domain of ribosomal protein L2 {Escherichia coli [TaxId: 562]}
pgntlpmrnipvgstvhnvemkpgkggqlarsagtyvqivardgayvtlrlrsgemrkve
adcratlgevgnaehmlrvlgkagaarwrgvrptvrgtamnpvdhphgggegrnfgkhpv
tpwgvqtkgkktrsnkrtdkfivrr

Timeline for d2vhmc1:

• d2vhmc1 first appeared in SCOP 1.75
  
• d2vhmc1 appears in SCOPe 2.02
  
• d2vhmc1 appears in the current release, SCOPe 2.08