SCOPe 2.08: Domain d2va2b1: 2va2 B:241-343

Lineage for d2va2b1 (2va2 B:241-343)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.240: Lesion bypass DNA polymerase (Y-family), little finger domain [100878] (1 superfamily)
   beta-alpha-beta(2)-alpha-beta; antiparallel beta-sheet: order 1423; "reversed" ferredoxin-like topology

4. Superfamily d.240.1: Lesion bypass DNA polymerase (Y-family), little finger domain [100879] (2 families)

5. Family d.240.1.0: automated matches [231323] (1 protein)
   not a true family

6. Protein automated matches [231324] (5 species)
   not a true protein

7. Species Sulfolobus solfataricus [TaxId:273057] [231327] (33 PDB entries)

8. Domain d2va2b1: 2va2 B:241-343 [152817]
   Other proteins in same PDB: d2va2a2, d2va2b2, d2va2b3
   automated match to d2v4ra2
   protein/DNA complex; complexed with ca, dct

Details for d2va2b1

PDB Entry: 2va2, 2.8 Å

PDB Description: Complex structure of Sulfolobus solfataricus DPO4 and DNA duplex containing a hydrophobic thymine isostere 2,4-difluorotoluene nucleotide in the template strand

PDB Compounds: (B:) DNA polymerase IV

SCOPe Domain Sequences for d2va2b1:

Sequence; same for both SEQRES and ATOM records:

>d2va2b1 d.240.1.0 (B:241-343) automated matches {Sulfolobus solfataricus [TaxId: 273057]}
vrksigrivtmkrnsrnleeikpylfraieesyykldkripkaihvvavtedldivsrgr
tfphgisketaysesvkllqkileederkirrigvrfskfiea

Timeline for d2va2b1:

• d2va2b1 first appeared in SCOP 1.75
  
• d2va2b1 appears in SCOPe 2.07