SCOPe 2.02: Domain d2rdof1: 2rdo F:1-178

Lineage for d2rdof1 (2rdo F:1-178)

1. Root: SCOPe 2.02

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.77: RL5-like [55281] (1 superfamily)
   beta-alpha-beta(2)-alpha-beta(3)-alpha; 2 layers, alpha/beta; antiparallel beta-sheet: order 231654

4. Superfamily d.77.1: RL5-like [55282] (3 families)

5. Family d.77.1.1: Ribosomal protein L5 [55283] (1 protein)

6. Protein Ribosomal protein L5 [55284] (5 species)
   synonym: 50S ribosomal protein L5p, HMAL5, HL13

7. Species Escherichia coli [TaxId:562] [160488] (29 PDB entries)
   Uniprot P62399 1-178

8. Domain d2rdof1: 2rdo F:1-178 [151943]
   Other proteins in same PDB: d2rdo01, d2rdo11, d2rdo31, d2rdo41, d2rdo81, d2rdoc1, d2rdoc2, d2rdod1, d2rdoe1, d2rdog1, d2rdog2, d2rdoh1, d2rdoh2, d2rdoi1, d2rdoi2, d2rdoj1, d2rdok1, d2rdol1, d2rdom1, d2rdon1, d2rdoo1, d2rdop1, d2rdoq1, d2rdor1, d2rdos1, d2rdot1, d2rdou1, d2rdov1, d2rdow1, d2rdox1, d2rdoy1, d2rdoz1
   automatically matched to 2AW4 F:1-178

Details for d2rdof1

PDB Entry: 2rdo, 9.1 Å

PDB Description: 50s subunit with ef-g(gdpnp) and rrf bound

PDB Compounds: (F:) 50S ribosomal protein L5

SCOPe Domain Sequences for d2rdof1:

Sequence; same for both SEQRES and ATOM records:

>d2rdof1 d.77.1.1 (F:1-178) Ribosomal protein L5 {Escherichia coli [TaxId: 562]}
aklhdyykdevvkklmtefnynsvmqvprvekitlnmgvgeaiadkklldnaaadlaais
gqkplitkarksvagfkirqgypigckvtlrgermwefferlitiavprirdfrglsaks
fdgrgnysmgvreqiifpeidydkvdrvrgldititttaksdeegrallaafdfpfrk

Timeline for d2rdof1:

• d2rdof1 first appeared in SCOP 1.75
  
• d2rdof1 appears in SCOPe 2.01
  
• d2rdof1 appears in SCOPe 2.03
  
• d2rdof1 appears in the current release, SCOPe 2.08