Lineage for d2r8ka1 (2r8k A:390-509)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2564907Fold d.240: Lesion bypass DNA polymerase (Y-family), little finger domain [100878] (1 superfamily)
    beta-alpha-beta(2)-alpha-beta; antiparallel beta-sheet: order 1423; "reversed" ferredoxin-like topology
  4. 2564908Superfamily d.240.1: Lesion bypass DNA polymerase (Y-family), little finger domain [100879] (2 families) (S)
  5. 2564909Family d.240.1.1: Lesion bypass DNA polymerase (Y-family), little finger domain [100880] (5 proteins)
  6. 2564971Protein DNA polymerase eta [100884] (1 species)
  7. 2564972Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [100885] (2 PDB entries)
  8. 2564975Domain d2r8ka1: 2r8k A:390-509 [151727]
    Other proteins in same PDB: d2r8ka2, d2r8ka3, d2r8kb2, d2r8kb3
    automatically matched to d1jiha1
    protein/DNA complex; complexed with ca, cpt, dtp

Details for d2r8ka1

PDB Entry: 2r8k (more details), 3.3 Å

PDB Description: Structure of the Eukaryotic DNA Polymerase eta in complex with 1,2-d(GpG)-cisplatin containing DNA
PDB Compounds: (A:) DNA Polymerase ETA

SCOPe Domain Sequences for d2r8ka1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2r8ka1 d.240.1.1 (A:390-509) DNA polymerase eta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
pvvksmmsnknlrgkscnsivdciswlevfcaeltsriqdleqeynkiviprtvsislkt
ksyevyrksgpvaykginfqshellkvgikfvtdldikgknksyypltklsmtitnfdii

SCOPe Domain Coordinates for d2r8ka1:

Click to download the PDB-style file with coordinates for d2r8ka1.
(The format of our PDB-style files is described here.)

Timeline for d2r8ka1: