Lineage for d2qbiw1 (2qbi W:6-84)

  1. Root: SCOPe 2.03
  2. 1287432Class b: All beta proteins [48724] (174 folds)
  3. 1332005Fold b.84: Barrel-sandwich hybrid [51229] (4 superfamilies)
    sandwich of half-barrel shaped beta-sheets
  4. 1332237Superfamily b.84.4: Ribosomal L27 protein-like [110324] (2 families) (S)
    rudiment single hybrid fold with a permuted topology
  5. 1332238Family b.84.4.1: Ribosomal L27 protein [110325] (1 protein)
    Pfam PF01016
  6. 1332239Protein Ribosomal protein L27 [110326] (3 species)
  7. 1332248Species Escherichia coli [TaxId:562] [159322] (29 PDB entries)
    Uniprot P0A7L8 1-84
  8. 1332264Domain d2qbiw1: 2qbi W:6-84 [150591]
    Other proteins in same PDB: d2qbi01, d2qbi11, d2qbi31, d2qbi41, d2qbi61, d2qbic1, d2qbic2, d2qbid1, d2qbie1, d2qbif1, d2qbig1, d2qbig2, d2qbih1, d2qbih2, d2qbii1, d2qbii2, d2qbij1, d2qbik1, d2qbil1, d2qbim1, d2qbin1, d2qbio1, d2qbip1, d2qbiq1, d2qbir1, d2qbis1, d2qbit1, d2qbiu1, d2qbiv1, d2qbix1, d2qbiy1, d2qbiz1
    automatically matched to 2AW4 W:1-84
    protein/RNA complex; complexed with lll, mg, zn

Details for d2qbiw1

PDB Entry: 2qbi (more details), 4 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). This file contains the 50S subunit of the first 70S ribosome, with gentamicin and RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.
PDB Compounds: (W:) 50S ribosomal protein L27

SCOPe Domain Sequences for d2qbiw1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2qbiw1 b.84.4.1 (W:6-84) Ribosomal protein L27 {Escherichia coli [TaxId: 562]}
ggstrngrdseakrlgvkrfggesvlagsiivrqrgtkfhaganvgcgrdhtlfakadgk
vkfevkgpknrkfisieae

SCOPe Domain Coordinates for d2qbiw1:

Click to download the PDB-style file with coordinates for d2qbiw1.
(The format of our PDB-style files is described here.)

Timeline for d2qbiw1: