SCOPe 2.05: Domain d2qbi31: 2qbi 3:1-64

Lineage for d2qbi31 (2qbi 3:1-64)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.301: L35p-like [143033] (1 superfamily)
   core: alpha-beta(3)-alpha; 2layers a/b

4. Superfamily d.301.1: L35p-like [143034] (1 family)
   automatically mapped to Pfam PF01632

5. Family d.301.1.1: Ribosomal protein L35p [143035] (1 protein)
   Pfam PF01632

6. Protein Ribosomal protein L35p [143036] (3 species)

7. Species Escherichia coli [TaxId:562] [143037] (27 PDB entries)
   Uniprot P0A7Q1 1-64

8. Domain d2qbi31: 2qbi 3:1-64 [150564]
   Other proteins in same PDB: d2qbi01, d2qbi11, d2qbi41, d2qbi61, d2qbic1, d2qbic2, d2qbid1, d2qbie1, d2qbif1, d2qbig1, d2qbig2, d2qbih1, d2qbih2, d2qbii1, d2qbii2, d2qbij1, d2qbik1, d2qbil1, d2qbim1, d2qbin1, d2qbio1, d2qbip1, d2qbiq1, d2qbir1, d2qbis1, d2qbit1, d2qbiu1, d2qbiv1, d2qbiw1, d2qbix1, d2qbiy1, d2qbiz1
   protein/RNA complex; complexed with lll, mg, zn
   protein/RNA complex; complexed with lll, mg, zn

Details for d2qbi31

PDB Entry: 2qbi, 4 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). This file contains the 50S subunit of the first 70S ribosome, with gentamicin and RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.

PDB Compounds: (3:) 50S ribosomal protein L35

SCOPe Domain Sequences for d2qbi31:

Sequence; same for both SEQRES and ATOM records:

>d2qbi31 d.301.1.1 (3:1-64) Ribosomal protein L35p {Escherichia coli [TaxId: 562]}
pkiktvrgaakrfkktgkggfkhkhanlrhiltkkatkrkrhlrpkamvskgdlglviac
lpya

Timeline for d2qbi31:

• d2qbi31 first appeared in SCOP 1.75
  
• d2qbi31 appears in SCOPe 2.04
  
• d2qbi31 appears in SCOPe 2.06
  
• d2qbi31 appears in the current release, SCOPe 2.08