SCOPe 2.06: Domain d2qbi11: 2qbi 1:3-52

Lineage for d2qbi11 (2qbi 1:3-52)

1. Root: SCOPe 2.06

2. Class i: Low resolution protein structures [58117] (25 folds)

3. Fold i.1: Ribosome and ribosomal fragments [58118] (1 superfamily)

4. Superfamily i.1.1: Ribosome and ribosomal fragments [58119] (3 families)

5. Family i.1.1.1: Ribosome complexes [58120] (3 proteins)

6. Protein 70S ribosome functional complex [58121] (4 species)

7. Species Escherichia coli [TaxId:562] [58123] (72 PDB entries)

8. Domain d2qbi11: 2qbi 1:3-52 [150563]
   Other proteins in same PDB: d2qbi01, d2qbi31, d2qbi41, d2qbi61, d2qbic1, d2qbic2, d2qbid1, d2qbie1, d2qbif1, d2qbig1, d2qbig2, d2qbih1, d2qbih2, d2qbii1, d2qbii2, d2qbij1, d2qbik1, d2qbil1, d2qbim1, d2qbin1, d2qbio1, d2qbiq1, d2qbir1, d2qbis1, d2qbit1, d2qbiu1, d2qbiv1, d2qbiw1, d2qbix1, d2qbiy1, d2qbiz1
   protein/RNA complex; complexed with lll, mg, zn
   protein/RNA complex; complexed with lll, mg, zn

Details for d2qbi11

PDB Entry: 2qbi, 4 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). This file contains the 50S subunit of the first 70S ribosome, with gentamicin and RRF bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.

PDB Compounds: (1:) 50S ribosomal protein L33

SCOPe Domain Sequences for d2qbi11:

Sequence; same for both SEQRES and ATOM records:

>d2qbi11 i.1.1.1 (1:3-52) 70S ribosome functional complex {Escherichia coli [TaxId: 562]}
girekiklvssagtghfytttknkrtkpeklelkkfdpvvrqhviykeak

Timeline for d2qbi11:

• d2qbi11 first appeared in SCOP 1.75
  
• d2qbi11 appears in SCOPe 2.05
  
• d2qbi11 appears in SCOPe 2.07
  
• d2qbi11 appears in the current release, SCOPe 2.08