SCOPe 2.07: Domain d2qbcn1: 2qbc N:1-120

Lineage for d2qbcn1 (2qbc N:1-120)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.188: Prokaryotic ribosomal protein L17 [64262] (1 superfamily)
   alpha-beta-alpha(3)-beta(2); 2 layers: alpha/beta;

4. Superfamily d.188.1: Prokaryotic ribosomal protein L17 [64263] (1 family)
   some topological similarity to ribosomal protein L22
   automatically mapped to Pfam PF01196

5. Family d.188.1.1: Prokaryotic ribosomal protein L17 [64264] (1 protein)

6. Protein Prokaryotic ribosomal protein L17 [64265] (4 species)

7. Species Escherichia coli [TaxId:562] [160270] (27 PDB entries)
   Uniprot P02416 1-127

8. Domain d2qbcn1: 2qbc N:1-120 [150420]
   Other proteins in same PDB: d2qbc01, d2qbc11, d2qbc31, d2qbc41, d2qbcc1, d2qbcc2, d2qbcd1, d2qbce1, d2qbcf1, d2qbcg1, d2qbcg2, d2qbch1, d2qbch2, d2qbci1, d2qbci2, d2qbcj1, d2qbck1, d2qbcl1, d2qbcm1, d2qbco1, d2qbcp1, d2qbcq1, d2qbcr1, d2qbcs1, d2qbct1, d2qbcu1, d2qbcv1, d2qbcw1, d2qbcx1, d2qbcy1, d2qbcz1
   protein/RNA complex; complexed with lll, mg, zn
   protein/RNA complex; complexed with lll, mg, zn

Details for d2qbcn1

PDB Entry: 2qbc, 3.54 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. This file contains the 50S subunit of the second 70S ribosome, with gentamicin bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.

PDB Compounds: (N:) 50S ribosomal protein L17

SCOPe Domain Sequences for d2qbcn1:

Sequence; same for both SEQRES and ATOM records:

>d2qbcn1 d.188.1.1 (N:1-120) Prokaryotic ribosomal protein L17 {Escherichia coli [TaxId: 562]}
mrhrksgrqlnrnsshrqamfrnmagslvrheiikttlpkakelrrvveplitlaktdsv
anrrlafartrdneivaklfnelgprfasraggytrilkcgfragdnapmayielvdrse

Timeline for d2qbcn1:

• d2qbcn1 first appeared in SCOP 1.75
  
• d2qbcn1 appears in SCOPe 2.06
  
• d2qbcn1 appears in the current release, SCOPe 2.08