Lineage for d2qbcl1 (2qbc L:2-144)

  1. Root: SCOPe 2.02
  2. 1143363Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 1156287Fold c.12: Ribosomal proteins L15p and L18e [52079] (1 superfamily)
    core: three turns of irregular (beta-beta-alpha)n superhelix
  4. 1156288Superfamily c.12.1: Ribosomal proteins L15p and L18e [52080] (1 family) (S)
  5. 1156289Family c.12.1.1: Ribosomal proteins L15p and L18e [52081] (2 proteins)
  6. 1156290Protein Ribosomal protein L15 (L15p) [52082] (4 species)
  7. 1156298Species Escherichia coli [TaxId:562] [141994] (29 PDB entries)
    Uniprot P02413 1-144
  8. 1156310Domain d2qbcl1: 2qbc L:2-144 [150418]
    Other proteins in same PDB: d2qbc01, d2qbc11, d2qbc31, d2qbc41, d2qbcc1, d2qbcc2, d2qbcd1, d2qbce1, d2qbcf1, d2qbcg1, d2qbcg2, d2qbch1, d2qbch2, d2qbci1, d2qbci2, d2qbcj1, d2qbck1, d2qbcm1, d2qbcn1, d2qbco1, d2qbcp1, d2qbcq1, d2qbcr1, d2qbcs1, d2qbct1, d2qbcu1, d2qbcv1, d2qbcw1, d2qbcx1, d2qbcy1, d2qbcz1
    automatically matched to d1vs6l1
    protein/RNA complex; complexed with lll, mg, zn

Details for d2qbcl1

PDB Entry: 2qbc (more details), 3.54 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. This file contains the 50S subunit of the second 70S ribosome, with gentamicin bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.
PDB Compounds: (L:) 50S ribosomal protein L15

SCOPe Domain Sequences for d2qbcl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2qbcl1 c.12.1.1 (L:2-144) Ribosomal protein L15 (L15p) {Escherichia coli [TaxId: 562]}
rlntlspaegskkagkrlgrgigsglgktggrghkgqksrsgggvrrgfeggqmplyrrl
pkfgftsrkaaitaeirlsdlakveggvvdlntlkaaniigiqiefakvilagevttpvt
vrglrvtkgaraaieaaggkiee

SCOPe Domain Coordinates for d2qbcl1:

Click to download the PDB-style file with coordinates for d2qbcl1.
(The format of our PDB-style files is described here.)

Timeline for d2qbcl1: