SCOPe 2.06: Domain d2qbch1: 2qbc H:59-149

Lineage for d2qbch1 (2qbc H:59-149)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.99: Ribosomal protein L9 C-domain [55652] (1 superfamily)
   alpha-beta-alpha(2)-beta(2); 2 layers: alpha/beta

4. Superfamily d.99.1: Ribosomal protein L9 C-domain [55653] (1 family)
   automatically mapped to Pfam PF03948

5. Family d.99.1.1: Ribosomal protein L9 C-domain [55654] (1 protein)

6. Protein Ribosomal protein L9 C-domain [55655] (3 species)

7. Species Escherichia coli [TaxId:562] [160580] (29 PDB entries)
   Uniprot P0A7R1 59-149

8. Domain d2qbch1: 2qbc H:59-149 [150412]
   Other proteins in same PDB: d2qbc01, d2qbc11, d2qbc31, d2qbc41, d2qbcc1, d2qbcc2, d2qbcd1, d2qbce1, d2qbcf1, d2qbcg1, d2qbcg2, d2qbch2, d2qbci1, d2qbci2, d2qbcj1, d2qbck1, d2qbcl1, d2qbcm1, d2qbcn1, d2qbco1, d2qbcp1, d2qbcq1, d2qbcr1, d2qbcs1, d2qbct1, d2qbcu1, d2qbcv1, d2qbcw1, d2qbcx1, d2qbcy1, d2qbcz1
   protein/RNA complex; complexed with lll, mg, zn
   protein/RNA complex; complexed with lll, mg, zn

Details for d2qbch1

PDB Entry: 2qbc, 3.54 Å

PDB Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. This file contains the 50S subunit of the second 70S ribosome, with gentamicin bound. The entire crystal structure contains two 70S ribosomes and is described in remark 400.

PDB Compounds: (H:) 50S ribosomal protein L9

SCOPe Domain Sequences for d2qbch1:

Sequence; same for both SEQRES and ATOM records:

>d2qbch1 d.99.1.1 (H:59-149) Ribosomal protein L9 C-domain {Escherichia coli [TaxId: 562]}
aevlaaanaraekinaletvtiaskagdegklfgsigtrdiadavtaagvevaksevrlp
ngvlrttgehevsfqvhsevfakvivnvvae

Timeline for d2qbch1:

• d2qbch1 first appeared in SCOP 1.75
  
• d2qbch1 appears in SCOPe 2.05
  
• d2qbch1 appears in SCOPe 2.07
  
• d2qbch1 appears in the current release, SCOPe 2.08