SCOPe 2.06: Domain d2qafa2: 2qaf A:1-322

Lineage for d2qafa2 (2qaf A:1-322)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.2: Ribulose-phoshate binding barrel [51366] (7 families)

5. Family c.1.2.3: Decarboxylase [51375] (4 proteins)

6. Protein Protozoan orotidine monophosphate decarboxylase [141749] (5 species)

7. Species Plasmodium falciparum (isolate 3D7) (Plasmodium falciparum 3D7) [TaxId:36329] [159376] (5 PDB entries)

8. Domain d2qafa2: 2qaf A:1-322 [150211]
   Other proteins in same PDB: d2qafa3, d2qafb3
   automated match to d2f84a1
   complexed with so4, u5p

Details for d2qafa2

PDB Entry: 2qaf, 1.95 Å

PDB Description: crystal structure of plasmodium falciparum orotidine 5'-phosphate decarboxylase covalently modified by 6-iodo-ump

PDB Compounds: (A:) Orotidine 5' monophosphate decarboxylase

SCOPe Domain Sequences for d2qafa2:

Sequence; same for both SEQRES and ATOM records:

>d2qafa2 c.1.2.3 (A:1-322) Protozoan orotidine monophosphate decarboxylase {Plasmodium falciparum (isolate 3D7) (Plasmodium falciparum 3D7) [TaxId: 36329]}
mgfkvklekrrnaintclcigldpdekdienfmknekennynnikknlkekyinnvsikk
dillkapdniireekseeffyffnhfcfyiinetnkyaltfkmnfafyipygsvgidvlk
nvfdylyelniptildmkindigntvknyrkfifeylksdsctvniymgtnmlkdicyde
eknkyysafvlvkttnpdsaifqknlsldnkqayvimaqealnmssylnleqnnefigfv
vgansydemnyirtyfpncyilspgigaqngdlhktltngyhksyekilinigraitknp
ypqkaaqmyydqinailkqnme

Timeline for d2qafa2:

• d2qafa2 first appeared in SCOP 1.75, called d2qafa1
  
• d2qafa2 was called d2qafa_ in SCOPe 2.05
  
• d2qafa2 appears in SCOPe 2.07
  
• d2qafa2 appears in the current release, SCOPe 2.08