SCOPe 2.06: Domain d2plya2: 2ply A:438-510

Lineage for d2plya2 (2ply A:438-510)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
   core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down

4. Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (85 families)
   contains a small beta-sheet (wing)

5. Family a.4.5.35: C-terminal fragment of elongation factor SelB [74683] (2 proteins)

6. Protein C-terminal fragment of elongation factor SelB [74684] (1 species)
   duplication: tandem repeat of four "winged helix" domains
7. Species Moorella thermoacetica [TaxId:1525] [74685] (4 PDB entries)

8. Domain d2plya2: 2ply A:438-510 [149652]
   automatically matched to d1lvaa2
   protein/RNA complex; complexed with ca, cl, mg, na

Details for d2plya2

PDB Entry: 2ply, 2.6 Å

PDB Description: Structure of the mRNA binding fragment of elongation factor SelB in complex with SECIS RNA.

PDB Compounds: (A:) Selenocysteine-specific elongation factor

SCOPe Domain Sequences for d2plya2:

Sequence; same for both SEQRES and ATOM records:

>d2plya2 a.4.5.35 (A:438-510) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
eryqawwqavtraleefhsryplrpglareelrsryfsrlparvyqalleewsregrlql
aantvalagftps

Timeline for d2plya2:

• d2plya2 first appeared in SCOP 1.75
  
• d2plya2 appears in SCOPe 2.05
  
• d2plya2 appears in the current release, SCOPe 2.07