SCOPe 2.03: Domain d2p7ja2: 2p7j A:9-180

Lineage for d2p7ja2 (2p7j A:9-180)

1. Root: SCOPe 2.03

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.110: Profilin-like [55769] (10 superfamilies)
   core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha

4. Superfamily d.110.6: Sensory domain-like [103190] (3 families)
   alpha(2)-beta(2)-alpha(2)-beta(3); possibly related to the PAS domain

5. Family d.110.6.2: YkuI C-terminal domain-like [143732] (2 proteins)
   PfamB PB021678

6. Protein GGDEF family protein VP0354 [160677] (1 species)
   N-terminal region, consist of two sensory domain-like domains; there is a canonical sensory (PAS) domain in the middle region

7. Species Vibrio parahaemolyticus [TaxId:670] [160678] (3 PDB entries)
   Uniprot Q87SR8 207-299! Uniprot Q87SR8 35-206

8. Domain d2p7ja2: 2p7j A:9-180 [149288]
   complexed with acy, na, so4

Details for d2p7ja2

PDB Entry: 2p7j, 2.25 Å

PDB Description: Crystal structure of the domain of putative sensory box/GGDEF family protein from Vibrio parahaemolyticus

PDB Compounds: (A:) Putative sensory box/GGDEF family protein

SCOPe Domain Sequences for d2p7ja2:

Sequence; same for both SEQRES and ATOM records:

>d2p7ja2 d.110.6.2 (A:9-180) GGDEF family protein VP0354 {Vibrio parahaemolyticus [TaxId: 670]}
nnventakealhqlaytgreynniqdqietisdllghsqslydylrepskanltilenmw
ssvarnqklykqirfldtsgtekvrikydfktsiagpslilrdksareyfkyaqsldneq
isawgielerdkgelvyplspslrilmpisvndvrqgylvlnvdieylssll

Timeline for d2p7ja2:

• d2p7ja2 first appeared in SCOP 1.75
  
• d2p7ja2 appears in SCOPe 2.02
  
• d2p7ja2 appears in SCOPe 2.04
  
• d2p7ja2 appears in the current release, SCOPe 2.08