SCOPe 2.04: Domain d2jeba1: 2jeb A:-1-191

Lineage for d2jeba1 (2jeb A:-1-191)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.14: Ribosomal protein S5 domain 2-like [54210] (1 superfamily)
   core: beta(3)-alpha-beta-alpha; 2 layers: alpha/beta; left-handed crossover

4. Superfamily d.14.1: Ribosomal protein S5 domain 2-like [54211] (13 families)

5. Family d.14.1.4: Ribonuclease PH domain 1-like [54229] (11 proteins)

6. Protein Exosome complex exonuclease 2,ECX2 [159920] (2 species)

7. Species Sulfolobus solfataricus [TaxId:2287] [159922] (6 PDB entries)
   Uniprot Q9UXC0 1-191

8. Domain d2jeba1: 2jeb A:-1-191 [148015]
   Other proteins in same PDB: d2jeba2, d2jebb1, d2jebb2, d2jebi1, d2jebi2
   automated match to d2je6a1
   complexed with 1pe, cl, mn

Details for d2jeba1

PDB Entry: 2jeb, 2.4 Å

PDB Description: structure of a 9-subunit archaeal exosome bound to mn ions

PDB Compounds: (A:) exosome complex exonuclease 2

SCOPe Domain Sequences for d2jeba1:

Sequence, based on SEQRES records:

>d2jeba1 d.14.1.4 (A:-1-191) Exosome complex exonuclease 2,ECX2 {Sulfolobus solfataricus [TaxId: 2287]}
ghmsstpsnqniipiikkesivslfekgirqdgrkltdyrplsitldyakkadgsalvkl
gttmvlagtkleidkpyedtpnqgnlivnvellplayetfepgppdenaielarvvdrsl
rdskaldltklviepgksvwtvwldvyvldyggnvldactlasvaalyntkvykveqhsn
gisvnknevvgkl

Sequence, based on observed residues (ATOM records):

>d2jeba1 d.14.1.4 (A:-1-191) Exosome complex exonuclease 2,ECX2 {Sulfolobus solfataricus [TaxId: 2287]}
ghmsstpsnqniipiikkesivslfekgirqdgrkltdyrplsitldyakkadgsalvkl
gttmvlagtkleidkpyedtpnqgnlivnvellplayetfepgppdenaielarvvdrsl
rdskaldltklviepgksvwtvwldvyvldyggnvldactlasvaalyntkvykveqisv
nknevvgkl

Timeline for d2jeba1:

• d2jeba1 first appeared in SCOP 1.75
  
• d2jeba1 appears in SCOPe 2.03
  
• d2jeba1 appears in SCOPe 2.05
  
• d2jeba1 appears in the current release, SCOPe 2.08