SCOPe 2.06: Domain d2j8ub2: 2j8u B:1-99

Lineage for d2j8ub2 (2j8u B:1-99)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)

6. Protein beta2-microglobulin [88600] (6 species)

7. Species Human (Homo sapiens) [TaxId:9606] [88602] (424 PDB entries)
   Uniprot P61769 21-119 ! Uniprot P01884

8. Domain d2j8ub2: 2j8u B:1-99 [147919]
   Other proteins in same PDB: d2j8ua1, d2j8ua2, d2j8ub3, d2j8ue1, d2j8ue2, d2j8uf1, d2j8uf2, d2j8uh1, d2j8uh2, d2j8ui3, d2j8ul1, d2j8ul2, d2j8um1, d2j8um2
   automated match to d1a9bb_
   mutant

Details for d2j8ub2

PDB Entry: 2j8u, 2.88 Å

PDB Description: large cdr3a loop alteration as a function of mhc mutation.

PDB Compounds: (B:) Beta-2-microglobulin

SCOPe Domain Sequences for d2j8ub2:

Sequence; same for both SEQRES and ATOM records:

>d2j8ub2 b.1.1.2 (B:1-99) beta2-microglobulin {Human (Homo sapiens) [TaxId: 9606]}
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm

Timeline for d2j8ub2:

• d2j8ub2 first appeared in SCOP 1.75, called d2j8ub1
  
• d2j8ub2 was called d2j8ub_ in SCOPe 2.05
  
• d2j8ub2 appears in SCOPe 2.07
  
• d2j8ub2 appears in the current release, SCOPe 2.08