SCOPe 2.06: Domain d1y0vm1: 1y0v M:5-148

Lineage for d1y0vm1 (1y0v M:5-148)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.39: EF Hand-like [47472] (4 superfamilies)
   core: 4 helices; array of 2 hairpins, opened

4. Superfamily a.39.1: EF-hand [47473] (12 families)
   Duplication: consists of two EF-hand units: each is made of two helices connected with calcium-binding loop

5. Family a.39.1.5: Calmodulin-like [47502] (24 proteins)
   Duplication: made with two pairs of EF-hands

6. Protein Calmodulin [47516] (12 species)

7. Species African clawed frog (Xenopus laevis) [TaxId:8355] [47521] (19 PDB entries)

8. Domain d1y0vm1: 1y0v M:5-148 [145898]
   Other proteins in same PDB: d1y0vh2, d1y0vi2, d1y0vj2, d1y0vk2, d1y0vl2, d1y0vm2
   automatically matched to d2bbma_
   complexed with ca, mg, pop

Details for d1y0vm1

PDB Entry: 1y0v, 3.6 Å

PDB Description: Crystal structure of anthrax edema factor (EF) in complex with calmodulin and pyrophosphate

PDB Compounds: (M:) calmodulin

SCOPe Domain Sequences for d1y0vm1:

Sequence; same for both SEQRES and ATOM records:

>d1y0vm1 a.39.1.5 (M:5-148) Calmodulin {African clawed frog (Xenopus laevis) [TaxId: 8355]}
teeqiaefkeafslfdkdgdgtittkelgtvmrslgqnpteaelqdminevdadgngtid
fpefltmmarkmkdtdseeeireafrvfdkdgngyisaaelrhvmtnlgekltdeevdem
ireadidgdgqvnyeefvqmmtak

Timeline for d1y0vm1:

• d1y0vm1 first appeared in SCOP 1.75
  
• d1y0vm1 appears in SCOPe 2.05
  
• d1y0vm1 appears in SCOPe 2.07
  
• d1y0vm1 appears in the current release, SCOPe 2.08