SCOPe 2.05: Domain d1wyba1: 1wyb A:5-392

Lineage for d1wyba1 (1wyb A:5-392)

1. Root: SCOPe 2.05

2. Class e: Multi-domain proteins (alpha and beta) [56572] (68 folds)

3. Fold e.3: beta-lactamase/transpeptidase-like [56600] (1 superfamily)
   contains a cluster of helices and an alpha+beta sandwich

4. Superfamily e.3.1: beta-lactamase/transpeptidase-like [56601] (4 families)

5. Family e.3.1.1: beta-Lactamase/D-ala carboxypeptidase [56602] (19 proteins)

6. Protein 6-aminohexanoate-dimer hydrolase NylC [160972] (1 species)
   NylB'

7. Species Flavobacterium sp. [TaxId:239] [160973] (11 PDB entries)
   Uniprot P07062 5-392

8. Domain d1wyba1: 1wyb A:5-392 [145837]

Details for d1wyba1

PDB Entry: 1wyb, 1.8 Å

PDB Description: structure of 6-aminohexanoate-dimer hydrolase

PDB Compounds: (A:) 6-aminohexanoate-dimer hydrolase

SCOPe Domain Sequences for d1wyba1:

Sequence, based on SEQRES records:

>d1wyba1 e.3.1.1 (A:5-392) 6-aminohexanoate-dimer hydrolase NylC {Flavobacterium sp. [TaxId: 239]}
stgqhparypgaaageptldswqepphnrwafahlgemvpsaavsrrpvnapghalarlg
aiaaqlpdleqrleqtytdaflvlrgtevvaeyyragfapddrhllmsvskslcgtvvga
lvdegridpaqpvteyvpelagsvydgpsvlqvldmqisidynedyvdpasevqthgrsa
gwrtrrhgdpadtyeflttlrgdgstgefqycsantdvlawivervtglryvealstylw
akldadrdatitvdttgfgfahggvsctardlarvgrmmldggvapggrvvsedwvrrvl
aggsheamtdkgftntfpdgsytrqwwctgnergnvsgigihgqnlwldpltdsvivkls
swpdpdtehwhrlqngilldvsraldav

Sequence, based on observed residues (ATOM records):

>d1wyba1 e.3.1.1 (A:5-392) 6-aminohexanoate-dimer hydrolase NylC {Flavobacterium sp. [TaxId: 239]}
stgqhparypgaaageptldswqepphnrwafahlgemvpsaavsrrpghalarlgaiaa
qlpdleqrleqtytdaflvlrgtevvaeyyragfapddrhllmsvskslcgtvvgalvde
gridpaqpvteyvpelagsvydgpsvlqvldmqisidynesevqthgrsagwrtrrhgdp
adtyeflttlrgdgstgefqycsantdvlawivervtglryvealstylwakldadrdat
itvdttgfgfahggvsctardlarvgrmmldggvapggrvvsedwvrrvlaggsheamtd
kgftntfpdgsytrqwwctgnergnvsgigihgqnlwldpltdsvivklsswpdpdtehw
hrlqngilldvsraldav

Timeline for d1wyba1:

• d1wyba1 first appeared in SCOP 1.75
  
• d1wyba1 appears in SCOPe 2.04
  
• d1wyba1 appears in SCOPe 2.06
  
• d1wyba1 appears in the current release, SCOPe 2.08