SCOPe 2.07: Domain d2i2vn1: 2i2v N:1-120

Lineage for d2i2vn1 (2i2v N:1-120)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.188: Prokaryotic ribosomal protein L17 [64262] (1 superfamily)
   alpha-beta-alpha(3)-beta(2); 2 layers: alpha/beta;

4. Superfamily d.188.1: Prokaryotic ribosomal protein L17 [64263] (1 family)
   some topological similarity to ribosomal protein L22
   automatically mapped to Pfam PF01196

5. Family d.188.1.1: Prokaryotic ribosomal protein L17 [64264] (1 protein)

6. Protein Prokaryotic ribosomal protein L17 [64265] (4 species)

7. Species Escherichia coli [TaxId:562] [160270] (27 PDB entries)
   Uniprot P02416 1-127

8. Domain d2i2vn1: 2i2v N:1-120 [145496]
   Other proteins in same PDB: d2i2v01, d2i2v11, d2i2v21, d2i2v31, d2i2v41, d2i2vc1, d2i2vc2, d2i2vd1, d2i2ve1, d2i2vf1, d2i2vg1, d2i2vg2, d2i2vh1, d2i2vh2, d2i2vi1, d2i2vi2, d2i2vj1, d2i2vk1, d2i2vl1, d2i2vm1, d2i2vo1, d2i2vp1, d2i2vq1, d2i2vr1, d2i2vs1, d2i2vt1, d2i2vu1, d2i2vv1, d2i2vw1, d2i2vx1, d2i2vy1, d2i2vz1
   protein/RNA complex; complexed with mg, zn
   protein/RNA complex; complexed with mg, zn

Details for d2i2vn1

PDB Entry: 2i2v, 3.22 Å

PDB Description: Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. This file contains the 50s subunit of one 70s ribosome. The entire crystal structure contains two 70s ribosomes and is described in remark 400.

PDB Compounds: (N:) 50S ribosomal protein L17

SCOPe Domain Sequences for d2i2vn1:

Sequence; same for both SEQRES and ATOM records:

>d2i2vn1 d.188.1.1 (N:1-120) Prokaryotic ribosomal protein L17 {Escherichia coli [TaxId: 562]}
mrhrksgrqlnrnsshrqamfrnmagslvrheiikttlpkakelrrvveplitlaktdsv
anrrlafartrdneivaklfnelgprfasraggytrilkcgfragdnapmayielvdrse

Timeline for d2i2vn1:

• d2i2vn1 first appeared in SCOP 1.75
  
• d2i2vn1 appears in SCOPe 2.06
  
• d2i2vn1 appears in the current release, SCOPe 2.08