Lineage for d2hj9c1 (2hj9 C:52-270)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2534513Fold d.110: Profilin-like [55769] (10 superfamilies)
    core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
  4. 2535229Superfamily d.110.6: Sensory domain-like [103190] (5 families) (S)
    alpha(2)-beta(2)-alpha(2)-beta(3); possibly related to the PAS domain
  5. 2535275Family d.110.6.3: LuxQ-periplasmic domain-like [160679] (1 protein)
    Pfam PF09308; two-domain arrangement similar to the YkuI C-terminal domain-like
  6. 2535276Protein Autoinducer 2 sensor kinase/phosphatase LuxQ [160680] (3 species)
  7. 2535281Species Vibrio harveyi [TaxId:669] [160681] (3 PDB entries)
    Uniprot P54302 51-271! Uniprot P54302 52-270
  8. 2535284Domain d2hj9c1: 2hj9 C:52-270 [145395]
    Other proteins in same PDB: d2hj9a_, d2hj9b_
    the second PAS-domain is partly disordered in the crystal
    complexed with ai2

Details for d2hj9c1

PDB Entry: 2hj9 (more details), 2.34 Å

PDB Description: Crystal structure of the Autoinducer-2-bound form of Vibrio harveyi LuxP complexed with the periplasmic domain of LuxQ
PDB Compounds: (C:) Autoinducer 2 sensor kinase/phosphatase luxQ

SCOPe Domain Sequences for d2hj9c1:

Sequence, based on SEQRES records: (download)

>d2hj9c1 d.110.6.3 (C:52-270) Autoinducer 2 sensor kinase/phosphatase LuxQ {Vibrio harveyi [TaxId: 669]}
skqqtsalihnifdshfaaiqihhdsnsksevirdfytdrdtdvlnffflsidqsdpsht
pefrfltdhkgiiwddgnahfygvndlildslanrvsfsnnwyyinvmtsigsrhmlvrr
vpildpstgevlgfsfnavvldnnfalmeklksesnvdnvvlvansvplansligdepyn
vadvlqrkssdkrldkllvietpivvnavttelclltvq

Sequence, based on observed residues (ATOM records): (download)

>d2hj9c1 d.110.6.3 (C:52-270) Autoinducer 2 sensor kinase/phosphatase LuxQ {Vibrio harveyi [TaxId: 669]}
skqqtsalihnifdshfaaiqihhdsnsksevirdfytdrdtdvlnffflsidqsdpsht
pefrfltdhkgiiwddgnahfygvndlildslanrvsfsnnwyyinvmtsigsrhmlvrr
vpildpstgevlgfsfnavvldnnfalmeklksesnvdnvvlvansvplansligdepyn
vadvlqrllvietpivvnavttelclltvq

SCOPe Domain Coordinates for d2hj9c1:

Click to download the PDB-style file with coordinates for d2hj9c1.
(The format of our PDB-style files is described here.)

Timeline for d2hj9c1: