Lineage for d1ymmd1 (1ymm D:9-104)

  1. Root: SCOPe 2.04
  2. 1510239Class b: All beta proteins [48724] (176 folds)
  3. 1510240Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 1510241Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 1510242Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 1512530Protein T-cell antigen receptor [48933] (6 species)
    sequences may differ within each classified species
  7. 1512531Species Human (Homo sapiens), alpha-chain [TaxId:9606] [48935] (21 PDB entries)
  8. 1512556Domain d1ymmd1: 1ymm D:9-104 [144702]
    Other proteins in same PDB: d1ymma1, d1ymma2, d1ymmb1, d1ymmb2, d1ymme2
    complexed with nag

Details for d1ymmd1

PDB Entry: 1ymm (more details), 3.5 Å

PDB Description: tcr/hla-dr2b/mbp-peptide complex
PDB Compounds: (D:) T cell receptor alpha chain

SCOPe Domain Sequences for d1ymmd1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ymmd1 b.1.1.1 (D:9-104) T-cell antigen receptor {Human (Homo sapiens), alpha-chain [TaxId: 9606]}
qalsiqegenatmncsyktsinnlqwyrqnsgrglvhlilirsnerekhsgrlrvtldts
kksssllitasraadtasyfcatdttsgtykyifgt

SCOPe Domain Coordinates for d1ymmd1:

Click to download the PDB-style file with coordinates for d1ymmd1.
(The format of our PDB-style files is described here.)

Timeline for d1ymmd1: