Lineage for d1vs6s1 (1vs6 S:1-110)

  1. Root: SCOPe 2.02
  2. 1190016Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1203503Fold d.55: Ribosomal protein L22 [54842] (1 superfamily)
    beta-alpha(3)-beta(2); 2 layers: alpha/beta; related to the enolase/MLE N-domain fold by a circular permutation
  4. 1203504Superfamily d.55.1: Ribosomal protein L22 [54843] (1 family) (S)
    some topological similarity to prokaryotic ribosomal protein L17
  5. 1203505Family d.55.1.1: Ribosomal protein L22 [54844] (1 protein)
  6. 1203506Protein Ribosomal protein L22 [54845] (5 species)
  7. 1203514Species Escherichia coli [TaxId:562] [160266] (29 PDB entries)
    Uniprot P61175 1-110
  8. 1203532Domain d1vs6s1: 1vs6 S:1-110 [144472]
    Other proteins in same PDB: d1vs601, d1vs611, d1vs621, d1vs631, d1vs641, d1vs6c1, d1vs6c2, d1vs6d1, d1vs6e1, d1vs6f1, d1vs6g1, d1vs6g2, d1vs6h1, d1vs6h2, d1vs6i1, d1vs6i2, d1vs6j1, d1vs6k1, d1vs6l1, d1vs6m1, d1vs6n1, d1vs6o1, d1vs6p1, d1vs6q1, d1vs6r1, d1vs6t1, d1vs6u1, d1vs6v1, d1vs6w1, d1vs6x1, d1vs6y1, d1vs6z1
    automatically matched to 2AW4 S:1-110
    complexed with mg

Details for d1vs6s1

PDB Entry: 1vs6 (more details), 3.46 Å

PDB Description: Crystal structure of the bacterial ribosome from escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution. this file contains the 50s subunit of one 70s ribosome. the entire crystal structure contains two 70s ribosomes and is described in remark 400.
PDB Compounds: (S:) 50S ribosomal protein L22

SCOPe Domain Sequences for d1vs6s1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1vs6s1 d.55.1.1 (S:1-110) Ribosomal protein L22 {Escherichia coli [TaxId: 562]}
metiakhrharssaqkvrlvadlirgkkvsqaldiltytnkkaavlvkkvlesaianaeh
ndgadiddlkvtkifvdegpsmkrimprakgradrilkrtshitvvvsdr

SCOPe Domain Coordinates for d1vs6s1:

Click to download the PDB-style file with coordinates for d1vs6s1.
(The format of our PDB-style files is described here.)

Timeline for d1vs6s1: