Lineage for Protein: RabGEF1 (Rabex-5), ubiquitin-binding domain

  1. Root: SCOPe 2.05
  2. 1959977Class g: Small proteins [56992] (92 folds)
  3. 1965176Fold g.39: Glucocorticoid receptor-like (DNA-binding domain) [57715] (1 superfamily)
    alpha+beta metal(zinc)-bound fold
  4. 1965177Superfamily g.39.1: Glucocorticoid receptor-like (DNA-binding domain) [57716] (19 families) (S)
  5. 1965686Family g.39.1.15: A20-like zinc finger [144187] (1 protein)
    Pfam PF01754
  6. 1965687Protein RabGEF1 (Rabex-5), ubiquitin-binding domain [144188] (2 species)
    binds to ubiquitin with the extended C-terminal helix

Species:

  1. 1965688Cow (Bos taurus) [TaxId:9913] [144189] (2 PDB entries)
    Uniprot O18973 14-73
    1. Domain for 2fid:
    2. Domains for 2fif:
      1. 1965689Domain d2fifb_: 2fif B: [133519]
        Other proteins in same PDB: d2fifa_, d2fifc_, d2fife_
        automated match to d2fidb1
        complexed with so4, zn
      2. 1965690Domain d2fifd_: 2fif D: [133521]
        Other proteins in same PDB: d2fifa_, d2fifc_, d2fife_
        automated match to d2fidb1
        complexed with so4, zn
      3. 1965691Domain d2fiff_: 2fif F: [133523]
        Other proteins in same PDB: d2fifa_, d2fifc_, d2fife_
        automated match to d2fidb1
        complexed with so4, zn
  2. 1965693Human (Homo sapiens) [TaxId:9606] [144190] (2 PDB entries)
    Uniprot Q9UJ41 17-74
    1. Domain for 2c7m:
    2. Domains for 2c7n:
      1. 1965694Domain d2c7na1: 2c7n A:18-73 [130069]
        Other proteins in same PDB: d2c7nb1, d2c7nd1, d2c7nf1, d2c7nh1, d2c7nj1, d2c7nl1
        automatically matched to 2C7M A:18-75
        complexed with zn
      2. 1965695Domain d2c7nc1: 2c7n C:17-73 [130071]
        Other proteins in same PDB: d2c7nb1, d2c7nd1, d2c7nf1, d2c7nh1, d2c7nj1, d2c7nl1
        automatically matched to 2C7M A:18-75
        complexed with zn
      3. 1965696Domain d2c7ng1: 2c7n G:17-71 [130074]
        Other proteins in same PDB: d2c7nb1, d2c7nd1, d2c7nf1, d2c7nh1, d2c7nj1, d2c7nl1
        automatically matched to 2C7M A:18-75
        complexed with zn
      4. 1965697Domain d2c7ni1: 2c7n I:17-74 [130076]
        Other proteins in same PDB: d2c7nb1, d2c7nd1, d2c7nf1, d2c7nh1, d2c7nj1, d2c7nl1
        automatically matched to 2C7M A:18-75
        complexed with zn

More info for Protein RabGEF1 (Rabex-5), ubiquitin-binding domain from g.39.1.15: A20-like zinc finger

Timeline for Protein RabGEF1 (Rabex-5), ubiquitin-binding domain from g.39.1.15: A20-like zinc finger: