Lineage for Protein: RabGEF1 (Rabex-5), ubiquitin-binding domain

  1. Root: SCOP 1.75
  2. 888632Class g: Small proteins [56992] (90 folds)
  3. 892407Fold g.39: Glucocorticoid receptor-like (DNA-binding domain) [57715] (1 superfamily)
    alpha+beta metal(zinc)-bound fold
  4. 892408Superfamily g.39.1: Glucocorticoid receptor-like (DNA-binding domain) [57716] (18 families) (S)
  5. 892877Family g.39.1.15: A20-like zinc finger [144187] (1 protein)
    Pfam PF01754
  6. 892878Protein RabGEF1 (Rabex-5), ubiquitin-binding domain [144188] (2 species)
    binds to ubiquitin with the extended C-terminal helix

Species:

  1. 892879Cow (Bos taurus) [TaxId:9913] [144189] (2 PDB entries)
    Uniprot O18973 14-73
    1. Domain for 2fid:
    2. Domains for 2fif:
      1. 892880Domain d2fifb1: 2fif B:15-73 [133519]
        Other proteins in same PDB: d2fifa1, d2fifc1, d2fife1
        automatically matched to 2FID B:14-73
        complexed with so4, zn
      2. 892881Domain d2fifd1: 2fif D:16-73 [133521]
        Other proteins in same PDB: d2fifa1, d2fifc1, d2fife1
        automatically matched to 2FID B:14-73
        complexed with so4, zn
      3. 892882Domain d2fiff1: 2fif F:17-72 [133523]
        Other proteins in same PDB: d2fifa1, d2fifc1, d2fife1
        automatically matched to 2FID B:14-73
        complexed with so4, zn
  2. 892884Human (Homo sapiens) [TaxId:9606] [144190] (2 PDB entries)
    Uniprot Q9UJ41 17-74
    1. Domain for 2c7m:
    2. Domains for 2c7n:
      1. 892885Domain d2c7na1: 2c7n A:18-73 [130069]
        Other proteins in same PDB: d2c7nb1, d2c7nd1, d2c7nf1, d2c7nh1, d2c7nj1, d2c7nl1
        automatically matched to 2C7M A:18-75
        complexed with zn
      2. 892886Domain d2c7nc1: 2c7n C:17-73 [130071]
        Other proteins in same PDB: d2c7nb1, d2c7nd1, d2c7nf1, d2c7nh1, d2c7nj1, d2c7nl1
        automatically matched to 2C7M A:18-75
        complexed with zn
      3. 892887Domain d2c7ng1: 2c7n G:17-71 [130074]
        Other proteins in same PDB: d2c7nb1, d2c7nd1, d2c7nf1, d2c7nh1, d2c7nj1, d2c7nl1
        automatically matched to 2C7M A:18-75
        complexed with zn
      4. 892888Domain d2c7ni1: 2c7n I:17-74 [130076]
        Other proteins in same PDB: d2c7nb1, d2c7nd1, d2c7nf1, d2c7nh1, d2c7nj1, d2c7nl1
        automatically matched to 2C7M A:18-75
        complexed with zn

More info for Protein RabGEF1 (Rabex-5), ubiquitin-binding domain from g.39.1.15: A20-like zinc finger

Timeline for Protein RabGEF1 (Rabex-5), ubiquitin-binding domain from g.39.1.15: A20-like zinc finger: