SCOPe 2.04: Family e.3.1.3: Dac-like

Lineage for Family e.3.1.3: Dac-like

1. Root: SCOPe 2.04

2. Class e: Multi-domain proteins (alpha and beta) [56572] (68 folds)

3. Fold e.3: beta-lactamase/transpeptidase-like [56600] (1 superfamily)
   contains a cluster of helices and an alpha+beta sandwich

4. Superfamily e.3.1: beta-lactamase/transpeptidase-like [56601] (4 families)

5. Family e.3.1.3: Dac-like [144040] (3 proteins)
   Pfam PF02113; D-Ala-D-Ala carboxypeptidase 3 (S13) family; contains a large insertion comprising two subdomains: (d1) aplha+beta with topological similarity to one subunit of the DTD-like family (69501) and (d2) six-stranded beta-sandwich with a crossed-loop topology

Proteins:

1. D-alanyl-D-alanine carboxypeptidase Dac [144043] (1 species)

   • Species Actinomadura sp. [TaxId:1989] [144044] (17 PDB entries)
     Uniprot P39045 50-516

2. DD-carboxypeptidase DacB [144045] (2 species)
   Penicillin-binding protein 4

   1. Species Escherichia coli [TaxId:562] [144046] (6 PDB entries)
      Uniprot P24228 22-477

   2. Species Haemophilus influenzae [TaxId:727] [189139] (4 PDB entries)

3. Penicillin-binding protein DacC [144041] (1 species)

   • Species Bacillus subtilis [TaxId:1423] [144042] (2 PDB entries)
     Uniprot P39844 34-491

More info for Family e.3.1.3: Dac-like

Timeline for Family e.3.1.3: Dac-like:

• Family e.3.1.3: Dac-like first appeared in SCOP 1.73
  
• Family e.3.1.3: Dac-like appears in SCOPe 2.03
  
• Family e.3.1.3: Dac-like appears in SCOPe 2.05
  
• Family e.3.1.3: Dac-like appears in the current release, SCOPe 2.08