Lineage for Species: SARS coronavirus [TaxId: 227859]

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2566909Fold d.318: SARS receptor-binding domain-like [143586] (1 superfamily)
    core: 3 layers, a/b/a; antiparallel beta-sheet of 5 strands, order 13542
  4. 2566910Superfamily d.318.1: SARS receptor-binding domain-like [143587] (1 family) (S)
    automatically mapped to Pfam PF09408
  5. 2566911Family d.318.1.1: SARS receptor-binding domain-like [143588] (1 protein)
    part of PfamB PB000266
  6. 2566912Protein Spike protein S1 [143589] (1 species)
  7. 2566913Species SARS coronavirus [TaxId:227859] [143590] (12 PDB entries)
    Uniprot P59594 320-502! Uniprot P59594 321-512! Uniprot P59594 323-502

PDB entries in Species: SARS coronavirus [TaxId: 227859]:

  1. Domain(s) for 2ajf:
    1. 2566923Domain d2ajfe1: 2ajf E:323-502 [126884]
      Other proteins in same PDB: d2ajfa_, d2ajfb_
      complexed with cl, nag, zn
    2. 2566924Domain d2ajff_: 2ajf F: [126885]
      Other proteins in same PDB: d2ajfa_, d2ajfb_
      automated match to d2dd8s1
      complexed with cl, nag, zn
  2. Domain(s) for 2dd8:
  3. Domain(s) for 2ghv:
    1. 2566914Domain d2ghvc1: 2ghv C:320-502 [135214]
    2. 2566915Domain d2ghve_: 2ghv E: [135215]
      automated match to d2dd8s1
  4. Domain(s) for 2ghw:
    1. 2566917Domain d2ghwa_: 2ghw A: [135216]
      Other proteins in same PDB: d2ghwb1, d2ghwb2, d2ghwd1, d2ghwd2
      automated match to d2dd8s1
      complexed with cl
    2. 2566918Domain d2ghwc_: 2ghw C: [135217]
      Other proteins in same PDB: d2ghwb1, d2ghwb2, d2ghwd1, d2ghwd2
      automated match to d2dd8s1
      complexed with cl
  5. Domain(s) for 3bgf:
    1. 2566929Domain d3bgfa_: 3bgf A: [245370]
      Other proteins in same PDB: d3bgfc1, d3bgfc2, d3bgfl1, d3bgfl2
      automated match to d2ghwa_
    2. 2566930Domain d3bgfs_: 3bgf S: [245375]
      Other proteins in same PDB: d3bgfc1, d3bgfc2, d3bgfl1, d3bgfl2
      automated match to d2ghwa_
  6. Domain(s) for 3d0g:
    1. 2566925Domain d3d0ge_: 3d0g E: [157170]
      Other proteins in same PDB: d3d0ga_, d3d0gb_
      automated match to d2ajfe1
      complexed with cl, nag, ndg, zn
    2. 2566926Domain d3d0gf_: 3d0g F: [157171]
      Other proteins in same PDB: d3d0ga_, d3d0gb_
      automated match to d2ajfe1
      complexed with cl, nag, ndg, zn
  7. Domain(s) for 3d0h:
    1. 2566935Domain d3d0he_: 3d0h E: [245599]
      Other proteins in same PDB: d3d0ha_, d3d0hb_
      automated match to d2ghwa_
      complexed with cl, nag, ndg, zn
    2. 2566936Domain d3d0hf_: 3d0h F: [245600]
      Other proteins in same PDB: d3d0ha_, d3d0hb_
      automated match to d2ghwa_
      complexed with cl, nag, ndg, zn
  8. Domain(s) for 3d0i:
    1. 2566927Domain d3d0ie_: 3d0i E: [173602]
      Other proteins in same PDB: d3d0ia_, d3d0ib_
      automated match to d2ajfe1
      complexed with cl, nag, ndg, zn
    2. 2566928Domain d3d0if_: 3d0i F: [173603]
      Other proteins in same PDB: d3d0ia_, d3d0ib_
      automated match to d2ajfe1
      complexed with cl, nag, ndg, zn
  9. Domain(s) for 3sci:
    1. 2566919Domain d3scie_: 3sci E: [239714]
      Other proteins in same PDB: d3scia_, d3scib_
      automated match to d2dd8s1
      complexed with cl, zn
    2. 2566920Domain d3scif_: 3sci F: [239715]
      Other proteins in same PDB: d3scia_, d3scib_
      automated match to d2dd8s1
      complexed with cl, zn
  10. Domain(s) for 3scj:
    1. 2566921Domain d3scje_: 3scj E: [249345]
      Other proteins in same PDB: d3scja_, d3scjb_
      automated match to d2ghwc_
      complexed with cl, zn
    2. 2566922Domain d3scjf_: 3scj F: [249346]
      Other proteins in same PDB: d3scja_, d3scjb_
      automated match to d2ghwc_
      complexed with cl, zn
  11. Domain(s) for 3sck:
    1. 2566933Domain d3scke_: 3sck E: [249349]
      Other proteins in same PDB: d3scka_, d3sckb_
      automated match to d3d0ie_
      complexed with cl, zn
    2. 2566934Domain d3sckf_: 3sck F: [249350]
      Other proteins in same PDB: d3scka_, d3sckb_
      automated match to d3d0ie_
      complexed with cl, zn
  12. Domain(s) for 3scl:
    1. 2566931Domain d3scle_: 3scl E: [249353]
      Other proteins in same PDB: d3scla_, d3sclb_
      automated match to d2ghwa_
      complexed with cl, zn
    2. 2566932Domain d3sclf_: 3scl F: [249354]
      Other proteins in same PDB: d3scla_, d3sclb_
      automated match to d2ghwa_
      complexed with cl, zn

More info for Species SARS coronavirus [TaxId:227859] from d.318.1.1 Spike protein S1

Timeline for Species SARS coronavirus [TaxId:227859] from d.318.1.1 Spike protein S1: