SCOPe 2.06: Protein: Protozoan orotidine monophosphate decarboxylase

Lineage for Protein: Protozoan orotidine monophosphate decarboxylase

Root: SCOPe 2.06
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.2: Ribulose-phoshate binding barrel [51366] (7 families)
Family c.1.2.3: Decarboxylase [51375] (4 proteins)
Protein Protozoan orotidine monophosphate decarboxylase [141749] (5 species)

Species:

Malaria parasite (Plasmodium falciparum) [TaxId:5833] [141751] (2 PDB entries)
Uniprot Q8T6J6 1-323
1. Domains for 3bpw:
  1. Domain d3bpwa1: 3bpw A:1-323 [172776]
    Other proteins in same PDB: d3bpwa2, d3bpwb2
    automated match to d2f84a1
    complexed with peg, po4, xmp
  2. Domain d3bpwb1: 3bpw B:1-320 [172777]
    Other proteins in same PDB: d3bpwa2, d3bpwb2
    automated match to d2f84a1
    complexed with peg, po4, xmp
2. Domains for 3vi2:
  1. Domain d3vi2a_: 3vi2 A: [192203]
    automated match to d2f84a1
    complexed with hmz, na
  2. Domain d3vi2b_: 3vi2 B: [192204]
    automated match to d2f84a1
    complexed with hmz, na
Plasmodium berghei [TaxId:5821] [141752] (1 PDB entry)
Uniprot Q4Z4C3 2-325
- Domain for 2fds:
  - Domain d2fdsa1: 2fds A:1-324 [133320]
    Other proteins in same PDB: d2fdsb_
    complexed with iod
Plasmodium falciparum (isolate 3D7) (Plasmodium falciparum 3D7) [TaxId:36329] [159376] (5 PDB entries)
1. Domain for 2f84:
  - Domain d2f84a1: 2f84 A:1-323 [133118]
    complexed with po4
2. Domain for 2q8l:
  - Domain d2q8la_: 2q8l A: [139891]
    automated match to d2f84a1
    complexed with po4
3. Domains for 2q8z:
  1. Domain d2q8za2: 2q8z A:1-323 [150133]
    Other proteins in same PDB: d2q8za3
    automated match to d2f84a1
    complexed with 7pe, nup, peg, so4
  2. Domain d2q8zb_: 2q8z B: [150134]
    Other proteins in same PDB: d2q8za3
    automated match to d2f84a1
    complexed with 7pe, nup, peg, so4
4. Domains for 2qaf:
  1. Domain d2qafa2: 2qaf A:1-322 [150211]
    Other proteins in same PDB: d2qafa3, d2qafb3
    automated match to d2f84a1
    complexed with so4, u5p
  2. Domain d2qafb2: 2qaf B:1-321 [150212]
    Other proteins in same PDB: d2qafa3, d2qafb3
    automated match to d2f84a1
    complexed with so4, u5p
5. Domains for 3bar:
  1. Domain d3bara2: 3bar A:1-321 [155036]
    Other proteins in same PDB: d3bara3, d3barb3
    automated match to d2f84a1
    complexed with u5p
  2. Domain d3barb2: 3bar B:1-321 [155037]
    Other proteins in same PDB: d3bara3, d3barb3
    automated match to d2f84a1
    complexed with u5p
Plasmodium vivax [TaxId:5855] [141750] (1 PDB entry)
- Domain for 2guu:
  - Domain d2guua1: 2guu A:21-352 [135747]
    complexed with up6
Plasmodium yoelii [TaxId:5861] [141753] (1 PDB entry)
Uniprot Q7RPE4 2-322
- Domain for 2aqw:
  - Domain d2aqwa1: 2aqw A:2-322 [127184]
    complexed with iod, so4

More info for Protein Protozoan orotidine monophosphate decarboxylase from c.1.2.3: Decarboxylase

Timeline for Protein Protozoan orotidine monophosphate decarboxylase from c.1.2.3: Decarboxylase:

Protein Protozoan orotidine monophosphate decarboxylase from c.1.2.3: Decarboxylase first appeared in SCOP 1.73
Protein Protozoan orotidine monophosphate decarboxylase from c.1.2.3: Decarboxylase appears in SCOPe 2.05
Protein Protozoan orotidine monophosphate decarboxylase from c.1.2.3: Decarboxylase appears in SCOPe 2.07
Protein Protozoan orotidine monophosphate decarboxylase from c.1.2.3: Decarboxylase appears in the current release, SCOPe 2.08