Lineage for Species: Nostoc punctiforme [TaxId: 272131]

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2813492Fold b.80: Single-stranded right-handed beta-helix [51125] (8 superfamilies)
    superhelix turns are made of parallel beta-strands and (short) turns
  4. 2813805Superfamily b.80.8: Pentapeptide repeat-like [141571] (2 families) (S)
    superhelix turns are made of four short strands each; duplication: the sequence pentapeptide repeats correspond to individual strands
  5. 2813806Family b.80.8.1: Pentapeptide repeats [141572] (4 proteins)
    Pfam PF00805 (covers eight repeats or two full superhelical turns)
    this is a repeat family; one repeat unit is 2bm4 A:81-101 found in domain
  6. 2813814Protein NP275-NP276 [141575] (1 species)
    Two consecuitive ORFs in the same frame that maintain the sequence periodicity; probable single ORF disrupted by the nonsense mutation
  7. 2813815Species Nostoc punctiforme [TaxId:272131] [141576] (2 PDB entries)

PDB entries in Species: Nostoc punctiforme [TaxId: 272131]:

  1. Domain(s) for 2j8i:
    1. 2813817Domain d2j8ia1: 2j8i A:2-98 [138139]
      Other proteins in same PDB: d2j8ia2, d2j8ib3
      'Truncated form', NP275 only
      complexed with cl
      applies to all domains of a family if the common domain is composed of a different number of small repeating units
    2. 2813818Domain d2j8ib2: 2j8i B:2-98 [138140]
      Other proteins in same PDB: d2j8ia2, d2j8ib3
      automated match to d2j8ia1
      complexed with cl
      applies to all domains of a family if the common domain is composed of a different number of small repeating units
  2. Domain(s) for 2j8k:
    • 2813816Domain d2j8ka1: 2j8k A:2-175 [138141]
      Other proteins in same PDB: d2j8ka2
      'Fusion form' produced by the mutation of the intervening stop codon
      complexed with mes, so4

More info for Species Nostoc punctiforme [TaxId:272131] from b.80.8.1 NP275-NP276

Timeline for Species Nostoc punctiforme [TaxId:272131] from b.80.8.1 NP275-NP276: