SCOPe 2.04: Domain d2oj3a_: 2oj3 A:

Lineage for d2oj3a_ (2oj3 A:)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

4. Superfamily d.58.7: RNA-binding domain, RBD [54928] (6 families)

5. Family d.58.7.1: Canonical RBD [54929] (68 proteins)

6. Protein Splicesomal U1A protein [54932] (2 species)
   duplication: contains two domains of this fold

7. Species Human (Homo sapiens) [TaxId:9606] [54933] (43 PDB entries)
   Uniprot P09012 1-97 ! Uniprot P09012 4-98 ! Uniprot P09012 1-98

8. Domain d2oj3a_: 2oj3 A: [139101]
   automated match to d1auda_
   protein/RNA complex; complexed with nco, tl; mutant

Details for d2oj3a_

PDB Entry: 2oj3, 2.9 Å

PDB Description: Hepatitis Delta Virus ribozyme precursor structure, with C75U mutation, bound to Tl+ and cobalt hexammine (Co(NH3)63+)

PDB Compounds: (A:) U1 small nuclear ribonucleoprotein A

SCOPe Domain Sequences for d2oj3a_:

Sequence; same for both SEQRES and ATOM records:

>d2oj3a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
petrpnhtiyinnlnekikkdelkkslhaifsrfgqildilvsrslkmrgqafvifkevs
satnalrsmqgfpfydkpmriqyaktdsdiiakmk

Timeline for d2oj3a_:

• d2oj3a_ first appeared in SCOP 1.73, called d2oj3a1
  
• d2oj3a_ appears in SCOPe 2.03
  
• d2oj3a_ appears in SCOPe 2.05
  
• d2oj3a_ appears in the current release, SCOPe 2.08