SCOPe 2.02: Domain d2j2811: 2j28 1:1-54

Lineage for d2j2811 (2j28 1:1-54)

1. Root: SCOPe 2.02

2. Class g: Small proteins [56992] (90 folds)

3. Fold g.41: Rubredoxin-like [57769] (17 superfamilies)
   metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2

4. Superfamily g.41.8: Zn-binding ribosomal proteins [57829] (8 families)

5. Family g.41.8.6: Ribosomal protein L33p [144203] (1 protein)
   Pfam PF00471; corresponds structurally and functionally to the ribosomal L44e from eukaryota and archaea; metal ion-binding site is lost in most members

6. Protein Ribosomal protein L33p [144204] (3 species)

7. Species Escherichia coli [TaxId:562] [144205] (9 PDB entries)
   Uniprot P0A7N9 1-54

8. Domain d2j2811: 2j28 1:1-54 [137960]
   Other proteins in same PDB: d2j2801, d2j2821, d2j2831, d2j2841, d2j28c1, d2j28c2, d2j28d1, d2j28e1, d2j28f1, d2j28g1, d2j28g2, d2j28h1, d2j28h2, d2j28i1, d2j28i2, d2j28j1, d2j28k1, d2j28l1, d2j28m1, d2j28n1, d2j28o1, d2j28p1, d2j28q1, d2j28r1, d2j28s1, d2j28t1, d2j28u1, d2j28v1, d2j28w1, d2j28x1, d2j28y1, d2j28z1
   automatically matched to 2AW4 1:1-54
   protein/RNA complex; complexed with mg

Details for d2j2811

PDB Entry: 2j28, 8 Å

PDB Description: model of e. coli srp bound to 70s rncs

PDB Compounds: (1:) 50S ribosomal protein L33

SCOPe Domain Sequences for d2j2811:

Sequence; same for both SEQRES and ATOM records:

>d2j2811 g.41.8.6 (1:1-54) Ribosomal protein L33p {Escherichia coli [TaxId: 562]}
akgirekiklvssagtghfytttknkrtkpeklelkkfdpvvrqhviykeakik

Timeline for d2j2811:

• d2j2811 first appeared in SCOP 1.73
  
• d2j2811 appears in SCOPe 2.01
  
• d2j2811 appears in SCOPe 2.03
  
• d2j2811 appears in the current release, SCOPe 2.08