SCOPe 2.05: Domain d2ibzd1: 2ibz D:62-260

Lineage for d2ibzd1 (2ibz D:62-260)

1. Root: SCOPe 2.05

2. Class a: All alpha proteins [46456] (286 folds)

3. Fold a.3: Cytochrome c [46625] (1 superfamily)
   core: 3 helices; folded leaf, opened

4. Superfamily a.3.1: Cytochrome c [46626] (9 families)
   covalently-bound heme completes the core

5. Family a.3.1.3: Cytochrome bc1 domain [46676] (2 proteins)

6. Protein Cytochrome bc1 domain [46677] (3 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [63462] (7 PDB entries)

8. Domain d2ibzd1: 2ibz D:62-260 [137221]
   Other proteins in same PDB: d2ibza1, d2ibza2, d2ibzb1, d2ibzb2, d2ibzc1, d2ibzc2, d2ibzd2, d2ibze1, d2ibze2, d2ibzf_, d2ibzg_, d2ibzh_, d2ibzi_, d2ibzx_, d2ibzy_
   automated match to d1kyod1
   complexed with fes, hem, sma, uq6

Details for d2ibzd1

PDB Entry: 2ibz, 2.3 Å

PDB Description: yeast cytochrome bc1 complex with stigmatellin

PDB Compounds: (D:) Cytochrome c1, heme protein, mitochondrial precursor

SCOPe Domain Sequences for d2ibzd1:

Sequence; same for both SEQRES and ATOM records:

>d2ibzd1 a.3.1.3 (D:62-260) Cytochrome bc1 domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
mtaaehglhapayawshngpfetfdhasirrgyqvyrevcaachsldrvawrtlvgvsht
neevrnmaeefeyddepdeqgnpkkrpgklsdyipgpypneqaaraanqgalppdlsliv
karhggcdyifslltgypdeppagvalppgsnynpyfpggsiamarvlfddmveyedgtp
attsqmakdvttflnwcae

Timeline for d2ibzd1:

• d2ibzd1 first appeared in SCOP 1.73
  
• d2ibzd1 appears in SCOPe 2.04
  
• d2ibzd1 appears in SCOPe 2.06
  
• d2ibzd1 appears in the current release, SCOPe 2.08