Lineage for d2i2vv1 (2i2v V:1-94)

  1. Root: SCOPe 2.02
  2. 1103260Class b: All beta proteins [48724] (174 folds)
  3. 1132055Fold b.53: Ribosomal protein L25-like [50714] (1 superfamily)
    barrel, closed; n=6, S=10; complex topology
  4. 1132056Superfamily b.53.1: Ribosomal protein L25-like [50715] (2 families) (S)
  5. 1132057Family b.53.1.1: Ribosomal protein L25-like [50716] (2 proteins)
  6. 1132058Protein Ribosomal protein L25 [50717] (1 species)
  7. 1132059Species Escherichia coli [TaxId:562] [50718] (32 PDB entries)
  8. 1132066Domain d2i2vv1: 2i2v V:1-94 [137017]
    Other proteins in same PDB: d2i2v01, d2i2v11, d2i2v21, d2i2v31, d2i2v41, d2i2vc1, d2i2vc2, d2i2vd1, d2i2ve1, d2i2vf1, d2i2vg1, d2i2vg2, d2i2vh1, d2i2vh2, d2i2vi1, d2i2vi2, d2i2vj1, d2i2vk1, d2i2vl1, d2i2vm1, d2i2vn1, d2i2vo1, d2i2vp1, d2i2vq1, d2i2vr1, d2i2vs1, d2i2vt1, d2i2vu1, d2i2vw1, d2i2vx1, d2i2vy1, d2i2vz1
    automatically matched to d1b75a_
    protein/RNA complex; complexed with mg, zn

Details for d2i2vv1

PDB Entry: 2i2v (more details), 3.22 Å

PDB Description: Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. This file contains the 50s subunit of one 70s ribosome. The entire crystal structure contains two 70s ribosomes and is described in remark 400.
PDB Compounds: (V:) 50S ribosomal protein L25

SCOPe Domain Sequences for d2i2vv1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2i2vv1 b.53.1.1 (V:1-94) Ribosomal protein L25 {Escherichia coli [TaxId: 562]}
mftinaevrkeqgkgasrrlraankfpaiiyggkeaplaieldhdkvmnmqakaefysev
ltivvdgkeikvkaqdvqrhpykpklqhidfvra

SCOPe Domain Coordinates for d2i2vv1:

Click to download the PDB-style file with coordinates for d2i2vv1.
(The format of our PDB-style files is described here.)

Timeline for d2i2vv1: