SCOPe 2.06: Domain d2i25m_: 2i25 M:

Lineage for d2i25m_ (2i25 M:)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.2: Lysozyme-like [53954] (1 superfamily)
   common alpha+beta motif for the active site region

4. Superfamily d.2.1: Lysozyme-like [53955] (12 families)

5. Family d.2.1.2: C-type lysozyme [53960] (3 proteins)
   automatically mapped to Pfam PF00062

6. Protein Lysozyme [53961] (14 species)
   ubiquitous in a variety of tissues and secretions

7. Species Chicken (Gallus gallus) [TaxId:9031] [53962] (716 PDB entries)
   Uniprot P00698

8. Domain d2i25m_: 2i25 M: [136989]
   Other proteins in same PDB: d2i25n1, d2i25n2, d2i25o1, d2i25o2
   automated match to d3lzta_

Details for d2i25m_

PDB Entry: 2i25, 1.8 Å

PDB Description: Crystal structure analysis of the nurse shark New antigen Receptor PBLA8 variable domain in complex with lysozyme

PDB Compounds: (M:) Lysozyme C

SCOPe Domain Sequences for d2i25m_:

Sequence; same for both SEQRES and ATOM records:

>d2i25m_ d.2.1.2 (M:) Lysozyme {Chicken (Gallus gallus) [TaxId: 9031]}
kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
qawirgcrl

Timeline for d2i25m_:

• d2i25m_ first appeared in SCOP 1.73, called d2i25m1
  
• d2i25m_ appears in SCOPe 2.05
  
• d2i25m_ appears in SCOPe 2.07
  
• d2i25m_ appears in the current release, SCOPe 2.08