Lineage for d2hmma2 (2hmm A:155-446)

  1. Root: SCOPe 2.01
  2. 1013083Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1040331Fold d.129: TBP-like [55944] (11 superfamilies)
    beta-alpha-beta(4)-alpha
  4. 1040549Superfamily d.129.3: Bet v1-like [55961] (11 families) (S)
    contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix
  5. 1040621Family d.129.3.3: Ring hydroxylating alpha subunit catalytic domain [55969] (6 proteins)
    Pfam PF00848; contains a few insertion and C-terminal extension compared with Bet v1
  6. 1040636Protein Naphthalene 1,2-dioxygenase alpha subunit, C-domain [55970] (2 species)
  7. 1040637Species Pseudomonas putida [TaxId:303] [55971] (16 PDB entries)
  8. 1040641Domain d2hmma2: 2hmm A:155-446 [136595]
    Other proteins in same PDB: d2hmma1, d2hmmb_
    automatically matched to d1o7ga2
    complexed with an3, edo, fe, fes, so4

Details for d2hmma2

PDB Entry: 2hmm (more details), 1.6 Å

PDB Description: crystal structure of naphthalene 1,2-dioxygenase bound to anthracene
PDB Compounds: (A:) Naphthalene 1,2-dioxygenase alpha subunit

SCOPe Domain Sequences for d2hmma2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2hmma2 d.129.3.3 (A:155-446) Naphthalene 1,2-dioxygenase alpha subunit, C-domain {Pseudomonas putida [TaxId: 303]}
eapplmdylgdaawylepmfkhsgglelvgppgkvvikanwkapaenfvgdayhvgwtha
sslrsgesifsslagnaalppegaglqmtskygsgmgvlwdgysgvhsadlvpelmafgg
akqerlnkeigdvrariyrshlnctvfpnnsmltcsgvfkvwnpidanttevwtyaivek
dmpedlkrrladsvqrtfgpagfwesddndnmetasqngkkyqsrdsdllsnlgfgedvy
gdavypgvvgksaigetsyrgfyrayqahvsssnwaefehasstwhteltkt

SCOPe Domain Coordinates for d2hmma2:

Click to download the PDB-style file with coordinates for d2hmma2.
(The format of our PDB-style files is described here.)

Timeline for d2hmma2:

View in 3D
Domains from same chain:
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d2hmma1
View in 3D
Domains from other chains:
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d2hmmb_