SCOPe 2.08: Domain d2hd5b_: 2hd5 B:

Lineage for d2hd5b_ (2hd5 B:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (11 families)

5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
   Pfam PF00240

6. Protein Ubiquitin [54238] (9 species)

7. Species Cow (Bos taurus) [TaxId:9913] [224919] (41 PDB entries)

8. Domain d2hd5b_: 2hd5 B: [136341]
   Other proteins in same PDB: d2hd5a1
   automated match to d1aara_
   complexed with zn

Details for d2hd5b_

PDB Entry: 2hd5, 1.85 Å

PDB Description: usp2 in complex with ubiquitin

PDB Compounds: (B:) Polyubiquitin

SCOPe Domain Sequences for d2hd5b_:

Sequence; same for both SEQRES and ATOM records:

>d2hd5b_ d.15.1.1 (B:) Ubiquitin {Cow (Bos taurus) [TaxId: 9913]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

Timeline for d2hd5b_:

• d2hd5b_ first appeared in SCOP 1.73, called d2hd5b1
  
• d2hd5b_ appears in SCOPe 2.07