SCOP 1.75: Domain d2gyda1: 2gyd A:2-171

Lineage for d2gyda1 (2gyd A:2-171)

1. Root: SCOP 1.75

2. Class a: All alpha proteins [46456] (284 folds)

3. Fold a.25: Ferritin-like [47239] (6 superfamilies)
   core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection

4. Superfamily a.25.1: Ferritin-like [47240] (9 families)
   contains bimetal-ion centre in the middle of the bundle

5. Family a.25.1.1: Ferritin [47241] (9 proteins)

6. Protein (Apo)ferritin [47246] (7 species)

7. Species Horse (Equus caballus), L chain [TaxId:9796] [47248] (20 PDB entries)

8. Domain d2gyda1: 2gyd A:2-171 [135856]
   automatically matched to d1hrs__
   complexed with cd, dfe

Details for d2gyda1

PDB Entry: 2gyd, 1.72 Å

PDB Description: Complex of equine apoferritin with the H-diaziflurane photolabeling reagent

PDB Compounds: (A:) ferritin L subunit

SCOP Domain Sequences for d2gyda1:

Sequence, based on SEQRES records:

>d2gyda1 a.25.1.1 (A:2-171) (Apo)ferritin {Horse (Equus caballus), L chain [TaxId: 9796]}
sqirqnysteveaavnrlvnlylrasytylslgfyfdrddvalegvchffrelaeekreg
aerllkmqnqrggralfqdlqkpsqdewgttldamkaaivlekslnqalldlhalgsaqa
dphlcdfleshfldeevklikkmgdhltniqrlvgsqaglgeylferltl

Sequence, based on observed residues (ATOM records):

>d2gyda1 a.25.1.1 (A:2-171) (Apo)ferritin {Horse (Equus caballus), L chain [TaxId: 9796]}
sqirqnysteveaavnrlvnlylrasytylslgfyfdrddvalegvchffrelaeekreg
aerllkmqnqrggralfqdlqkpsqdewgttldamkaaivlekslnqalldlhalgsaqa
dphlcdfleshfldeevklikkmgdhltniqrlvqaglgeylferltl

Timeline for d2gyda1:

• d2gyda1 first appeared in SCOP 1.73
  
• d2gyda1 is called d2gyda_ in SCOPe 2.01
  
• d2gyda1 appears in the current release, SCOPe 2.08, called d2gyda_