Lineage for d2gycj1 (2gyc J:4-143)

  1. Root: SCOPe 2.01
  2. 968085Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 980515Fold c.12: Ribosomal proteins L15p and L18e [52079] (1 superfamily)
    core: three turns of irregular (beta-beta-alpha)n superhelix
  4. 980516Superfamily c.12.1: Ribosomal proteins L15p and L18e [52080] (1 family) (S)
  5. 980517Family c.12.1.1: Ribosomal proteins L15p and L18e [52081] (2 proteins)
  6. 980518Protein Ribosomal protein L15 (L15p) [52082] (4 species)
  7. 980526Species Escherichia coli [TaxId:562] [141994] (29 PDB entries)
    Uniprot P02413 1-144
  8. 980552Domain d2gycj1: 2gyc J:4-143 [135850]
    Other proteins in same PDB: d2gyc11, d2gyc31, d2gyc32, d2gyc51, d2gyc52, d2gycb1, d2gycc1, d2gycd1, d2gycf1, d2gycf2, d2gycg1, d2gycg2, d2gych1, d2gyci1, d2gyck1, d2gycm1, d2gycn1, d2gyco1, d2gycq1, d2gycs1, d2gyct1, d2gycu1, d2gycw1, d2gycx1
    automatically matched to 2AW4 L:1-144
    protein/RNA complex

Details for d2gycj1

PDB Entry: 2gyc (more details), 15 Å

PDB Description: Structure of the 50S subunit of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143
PDB Compounds: (J:) 50S ribosomal protein L15

SCOPe Domain Sequences for d2gycj1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2gycj1 c.12.1.1 (J:4-143) Ribosomal protein L15 (L15p) {Escherichia coli [TaxId: 562]}
ntlspaegskkagkrlgrgigsglgktggrghkgqksrsgggvrrgfeggqmplyrrlpk
fgftsrkaaitaeirlsdlakveggvvdlntlkaaniigiqiefakvilagevttpvtvr
glrvtkgaraaieaaggkie

SCOPe Domain Coordinates for d2gycj1:

Click to download the PDB-style file with coordinates for d2gycj1.
(The format of our PDB-style files is described here.)

Timeline for d2gycj1: