Lineage for d2giyb1 (2giy B:219-394)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 651987Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 651988Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 651989Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (29 proteins)
  6. 651990Protein Alphaherpesvirus glycoprotein E [141008] (1 species)
    elaborated with insertions and C-terminal extensions
  7. 651991Species Human herpesvirus 1 [TaxId:10298] [141009] (2 PDB entries)
  8. 651993Domain d2giyb1: 2giy B:219-394 [135255]
    automatically matched to 2GIY A:218-394

Details for d2giyb1

PDB Entry: 2giy (more details), 1.78 Å

PDB Description: crystal structure of the c-terminal domain of the hsv-1 ge ectodomain
PDB Compounds: (B:) Glycoprotein E

SCOP Domain Sequences for d2giyb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2giyb1 b.1.1.1 (B:219-394) Alphaherpesvirus glycoprotein E {Human herpesvirus 1 [TaxId: 10298]}
vrgvtvrmetpeailfspgetfstnvsihaiahddqtysmdvvwlrfdvptscaemriye
sclyhpqlpeclspadapcaastwtsrlavrsyagcsrtnppprcsaeahmepvpglawq
aasvnlefrdaspqhsglylcvvyvndhihawghitistaaqyrnavveqpldieg

SCOP Domain Coordinates for d2giyb1:

Click to download the PDB-style file with coordinates for d2giyb1.
(The format of our PDB-style files is described here.)

Timeline for d2giyb1: