SCOPe 2.08: Domain d2ga9a_: 2ga9 A:

Lineage for d2ga9a_ (2ga9 A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest

4. Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (61 families)

5. Family c.66.1.25: mRNA cap methylase [88785] (4 proteins)

6. Protein automated matches [190302] (11 species)
   not a true protein

7. Species Vaccinia virus [TaxId:10245] [187111] (2 PDB entries)

8. Domain d2ga9a_: 2ga9 A: [134885]
   Other proteins in same PDB: d2ga9d1
   automated match to d1vpt__
   complexed with ags, ca

Details for d2ga9a_

PDB Entry: 2ga9, 2.3 Å

PDB Description: crystal structure of the heterodimeric vaccinia virus polyadenylate polymerase with bound atp-gamma-s

PDB Compounds: (A:) Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase

SCOPe Domain Sequences for d2ga9a_:

Sequence, based on SEQRES records:

>d2ga9a_ c.66.1.25 (A:) automated matches {Vaccinia virus [TaxId: 10245]}
mdvvsldkpfmyfeeidneldyepesanevakklpyqgqlklllgelfflsklqrhgild
gatvvyigsapgthirylrdhfynlgviikwmlidgrhhdpilnglrdvtlvtrfvdeey
lrsikkqlhpskiilisdvasaaggnepstadllsnyalqnvmisilnpvasslkwrcpf
pdqwikdfyiphgnkmlqpfapsysaemrllsiytgenmrltrvtksdavnyekkmyyln
kivrnkvvvnfdypnqeydyfhmyfmlrtvycnktfpttkakvlflqqsifrflnip

Sequence, based on observed residues (ATOM records):

>d2ga9a_ c.66.1.25 (A:) automated matches {Vaccinia virus [TaxId: 10245]}
mdvvsldkpfmyfeeidneldyepesklpyqgqlklllgelfflsklqrhgildgatvvy
igsapgthirylrdhfynlgviikwmlidgrhhdpilnglrdvtlvtrfvdeeylrsikk
qlhpskiilisdvasgnepstadllsnyalqnvmisilnpvasslkwrcpfpdqwikdfy
iphgnkmlqpfapsysaemrllsiytgenmrltrvtksdavnyekkmyylnkivrnkvvv
nfdypnqeydyfhmyfmlrtvycnktfpttkakvlflqqsifrflnip

Timeline for d2ga9a_:

• d2ga9a_ first appeared in SCOP 1.73, called d2ga9a1
  
• d2ga9a_ appears in SCOPe 2.07