Lineage for d2fnyz1 (2fny Z:-9-194)

  1. Root: SCOP 1.73
  2. 713694Class d: Alpha and beta proteins (a+b) [53931] (334 folds)
  3. 735798Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 735799Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (6 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 735943Family d.153.1.4: Proteasome subunits [56251] (3 proteins)
  6. 736244Protein Proteasome beta subunit (catalytic) [56252] (5 species)
  7. 736289Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [56254] (9 PDB entries)
    The structure of yeast proteasome complexed with the proteasome activator pa26 is available from PDB (1fnt). The 1FNT entry designates protein chains by both upper case and lower case letters creating problems with its processing and presentation in SCOP; the proteasome activator pa26 structure is classified elsewhere in SCOP (a.24.8)
  8. 736387Domain d2fnyz1: 2fny Z:-9-194 [133861]
    Other proteins in same PDB: d2fnya1, d2fnyb1, d2fnyc1, d2fnyd1, d2fnye1, d2fnyf1, d2fnyg1, d2fnyo1, d2fnyp1, d2fnyq1, d2fnyr1, d2fnys1, d2fnyt1, d2fnyu1
    automatically matched to d1g0ul_
    complexed with esy

Details for d2fnyz1

PDB Entry: 2fny (more details), 3 Å

PDB Description: Homobelactosin C bound to the yeast 20S proteasome
PDB Compounds: (Z:) Proteasome component C5

SCOP Domain Sequences for d2fnyz1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2fnyz1 d.153.1.4 (Z:-9-194) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
qfnpygdnggtilgiagedfavlagdtrnitdysinsryepkvfdcgdnivmsangfaad
gdalvkrfknsvkwyhfdhndkklsinsaarniqhllygkrffpyyvhtiiagldedgkg
avysfdpvgsyereqcraggaaaslimpfldnqvnfknqyepgtngkvkkplkylsveev
iklvrdsftsaterhiqvgdgleilivtkdgvrkefyelkrd

SCOP Domain Coordinates for d2fnyz1:

Click to download the PDB-style file with coordinates for d2fnyz1.
(The format of our PDB-style files is described here.)

Timeline for d2fnyz1:

  • d2fnyz1 is new in SCOP 1.73
  • d2fnyz1 does not appear in SCOP 1.75