SCOP 1.73: Domain d2f2ab2: 2f2a B:4-293

Lineage for d2f2ab2 (2f2a B:4-293)

1. Root: SCOP 1.73

2. Class d: Alpha and beta proteins (a+b) [53931] (334 folds)

3. Fold d.128: Glutamine synthetase/guanido kinase [55930] (1 superfamily)
   duplication: common core consists of two beta-alpha-beta2-alpha repeats

4. Superfamily d.128.1: Glutamine synthetase/guanido kinase [55931] (5 families)

5. Family d.128.1.5: GatB/GatE catalytic domain-like [143812] (2 proteins)
   N-terminal and C-terminal parts correspond to Pfam PF02934 (GatB_N) and Pfam 01162 (GatB), respectively

6. Protein Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, GatB, N-terminal domain [143813] (1 species)

7. Species Staphylococcus aureus [TaxId:1280] [143814] (5 PDB entries)

8. Domain d2f2ab2: 2f2a B:4-293 [132803]
   Other proteins in same PDB: d2f2aa1, d2f2ab1, d2f2ac1
   automatically matched to 2DF4 B:2-293
   complexed with gln, mg

Details for d2f2ab2

PDB Entry: 2f2a, 2.3 Å

PDB Description: Structure of tRNA-Dependent Amidotransferase GatCAB complexed with Gln

PDB Compounds: (B:) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B

SCOP Domain Sequences for d2f2ab2:

Sequence; same for both SEQRES and ATOM records:

>d2f2ab2 d.128.1.5 (B:4-293) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, GatB, N-terminal domain {Staphylococcus aureus [TaxId: 1280]}
etviglevhvelktdskmfspspahfgaepnsntnvidlaypgvlpvvnkravdwamraa
malnmeiateskfdrknyfypdnpkayqisqfdqpigengyidievdgetkrigitrlhm
eedagksthkgeyslvdlnrqgtplieivsepdirspkeayayleklrsiiqytgvsdvk
meegslrcdanislrpygqekfgtkaelknlnsfnyvrkgleyeekrqeeellnggeigq
etrrfdestgktilmrvkegsddyryfpepdivplyiddawkervrqtip

Timeline for d2f2ab2:

• d2f2ab2 is new in SCOP 1.73
  
• d2f2ab2 appears in SCOP 1.75
  
• d2f2ab2 appears in the current release, SCOPe 2.08