Lineage for d2efxd1 (2efx D:2-363)

  1. Root: SCOP 1.73
  2. 742018Class e: Multi-domain proteins (alpha and beta) [56572] (53 folds)
  3. 742172Fold e.3: beta-lactamase/transpeptidase-like [56600] (1 superfamily)
    contains a cluster of helices and an alpha+beta sandwich
  4. 742173Superfamily e.3.1: beta-lactamase/transpeptidase-like [56601] (3 families) (S)
  5. 742174Family e.3.1.1: beta-Lactamase/D-ala carboxypeptidase [56602] (16 proteins)
  6. 742469Protein D-Amino acid amidase DaaA [144038] (1 species)
  7. 742470Species Ochrobactrum anthropi [TaxId:529] [144039] (4 PDB entries)
  8. 742486Domain d2efxd1: 2efx D:2-363 [132118]
    automatically matched to 2DRW A:2-363
    complexed with ba, nfa

Details for d2efxd1

PDB Entry: 2efx (more details), 2.2 Å

PDB Description: The crystal structure of D-amino acid amidase from Ochrobactrum anthropi SV3 complexed with L-phenylalanine amide
PDB Compounds: (D:) D-amino acid amidase

SCOP Domain Sequences for d2efxd1:

Sequence, based on SEQRES records: (download)

>d2efxd1 e.3.1.1 (D:2-363) D-Amino acid amidase DaaA {Ochrobactrum anthropi [TaxId: 529]}
sdlnnaiqgilddhvargvvgvslalclpgeetslyqsgyadkfnkmpmtgdhlfriasc
tksfiatglhllvqdgtvdldepitrwfpdlpkaaqmpvrillnhrsglpdfetsmpmis
dkswtaqeivdfsfrhgvqkepwhgmeysntgyvlagmiiahetgkpysdhlrsrifapl
gmkdtwvgthetfpiereargymhaaaddenpqwdvsgagdpvdgvwdstewfplsgana
agdmvstprdivkflnalfdgrildqkrlwemkdnikpaffpgsntvanghglllmrygs
selkghlgqipghtsimgrdeetgaalmliqnsgagdfesfylkgvnepvdrvleaikns
rs

Sequence, based on observed residues (ATOM records): (download)

>d2efxd1 e.3.1.1 (D:2-363) D-Amino acid amidase DaaA {Ochrobactrum anthropi [TaxId: 529]}
sdlnnaiqgilddhvargvvgvslalclpgeetslyqsgyadkfnkmpmtgdhlfriasc
tksfiatglhllvqdgtvdldepitrwfpdlpkaaqmpvrillnhrsglpdfetsmpmis
dkswtaqeivdfsfrhgvqkepwhgmeysntgyvlagmiiahetgkpysdhlrsrifapl
gmkdtwvgthetfpiereargymhaaagdpvdgvwdstewfplsganaagdmvstprdiv
kflnalfdgrildqkrlwemkdnikpaffpgsntvanghglllmrygsselkghlgqipg
htsimgrdeetgaalmliqnsgagdfesfylkgvnepvdrvleaiknsrs

SCOP Domain Coordinates for d2efxd1:

Click to download the PDB-style file with coordinates for d2efxd1.
(The format of our PDB-style files is described here.)

Timeline for d2efxd1: